RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 TSSK6Q9BXA6 273 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 CADM1Q9BY67 442 aaKnown RBP8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 PBOV1Q9GZY1 135 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 CCDC134Q9H6E4 229 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 CMC2Q9NRP2 79 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 ACTR3BQ9P1U1 418 aa8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 NUFIP1Q9UHK0 495 aaKnown RBP8.04□□□□□ -1.12
RAPGEF1-205ENST00000419442 IGKV1-27A0A075B6S5 117 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 TMEM269A0A1B0GVZ9 245 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 ODAMA1E959 279 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 FAM183AA6NL82 134 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 DHRS7CA6NNS2 312 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 NCBP2LA6PVI3 153 aaKnown RBP8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 DYNC1I1O14576 645 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 SELENOFO60613 162 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 ENTPD6O75354 484 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 IFNGP01579 166 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 TTRP02766 147 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 CSN2P05814 226 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 NCK1P16333 377 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 ZNF3P17036 446 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 NUDT2P50583 147 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 SPIN3Q5JUX0 258 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 Q8IYB0 196 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 OR2T33Q8NG76 320 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 OR8H1Q8NGG4 311 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 OR14K1Q8NGZ2 314 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 OR2T10Q8NGZ9 312 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 HAVCR2Q8TDQ0 301 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 RNF166Q96A37 237 aaPredicted RBP8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 SIKE1Q9BRV8 207 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 TOLLIPQ9H0E2 274 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 ALX4Q9H161 411 aaPredicted RBP8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 MED20Q9H944 212 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 TMBIM4Q9HC24 238 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 STUB1Q9UNE7 303 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 PSG11Q9UQ72 335 aa8.03□□□□□ -1.12
RAPGEF1-205ENST00000419442 IGHV4OR15-8A0A075B7B6 117 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 A0A087WW49 117 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 IGHV1-3A0A0C4DH29 117 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 TRBV2A0A0J9YWF9 115 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 A0A1B0GTI1 187 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 KBTBD11-OT1A0A1B0GTJ5 212 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 RIIAD1A6NNX1 92 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 E2F6O75461 281 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 MED14OSP0DP75 135 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 NFYBP25208 207 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 DUSP1P28562 367 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 SOX6P35712 828 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 RAB9AP51151 201 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 AESQ08117 197 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 MFGE8Q08431 387 aaPredicted RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 SF3A3Q12874 501 aaKnown RBP eCLIP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 GALEQ14376 348 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 SAMD4BQ5PRF9 694 aaKnown RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 C8orf82Q6P1X6 216 aaPredicted RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 SLC25A26Q70HW3 274 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 TMEM104Q8NE00 496 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 TMEM106AQ96A25 262 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 COQ2Q96H96 371 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 RASL11BQ9BPW5 248 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 BTBD10Q9BSF8 475 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 PARD6BQ9BYG5 372 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 RBFOX1Q9NWB1 397 aaKnown RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 SAMD4AQ9UPU9 718 aaKnown RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 MRPS28Q9Y2Q9 187 aaKnown RBP8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 CEPT1Q9Y6K0 416 aa8.02□□□□□ -1.13
RAPGEF1-205ENST00000419442 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 DYNC1H1Q14204 4646 aaKnown RBP8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 FAM230AA0A1W2PPH8 454 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 NUPR2A6NF83 97 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 SIRPB1O00241 398 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 HSD17B6O14756 317 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 SRSF10O75494 262 aaKnown RBP8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 DEDDO75618 318 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 LGALS1P09382 135 aaKnown RBP8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 FSTP19883 344 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 RRM2P31350 389 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 NPBWR2P48146 333 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 HMGA2P52926 109 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 ROM1Q03395 351 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 SLC16A12Q6ZSM3 486 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 FAM58AQ8N1B3 248 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 OR9Q2Q8NGE9 314 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 RCN3Q96D15 328 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 TUBA4BQ9H853 241 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 SAR1AQ9NR31 198 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 FAM53CQ9NYF3 392 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 TAS2R1Q9NYW7 299 aa8.01□□□□□ -1.13
RAPGEF1-205ENST00000419442 DNAH6Q9C0G6 4158 aa8□□□□□ -1.13
RAPGEF1-205ENST00000419442 IGHV3-72A0A0B4J1Y9 119 aa8□□□□□ -1.13
RAPGEF1-205ENST00000419442 A0A0G2JND7 137 aa8□□□□□ -1.13
RAPGEF1-205ENST00000419442 PRR32B1ATL7 298 aa8□□□□□ -1.13
RAPGEF1-205ENST00000419442 NPIPB11E5RHQ5 1161 aa8□□□□□ -1.13
RAPGEF1-205ENST00000419442 G3V318 75 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms