RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 EXTL1Q92935 676 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 PARP11Q9NR21 331 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 CACFD1Q9UGQ2 172 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 TIMM10BQ9Y5J6 103 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF716A6NP11 495 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 COLCA2A8K830 154 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 PDCD6O75340 191 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 CD5P06127 495 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 FGF5P12034 268 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF14P17017 642 aaPredicted RBP10.26□□□□□ -0.77
LIMK1-202ENST00000418310 CCL20P78556 96 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 SPATA46Q5T0L3 261 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF565Q8N9K5 539 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 SMCO4Q9NRQ5 59 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 TUBD1Q9UJT1 453 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 hCG_38984A0A1B0GV85 526 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 ADAM20O43506 726 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 HIST1H3AP68431 136 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 C10orf91Q5T1B1 145 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 HIST2H3PS2Q5TEC6 136 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 HIST2H3AQ71DI3 136 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 TBC1D26Q86UD7 250 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 MSI2Q96DH6 328 aaKnown RBP10.26□□□□□ -0.77
LIMK1-202ENST00000418310 SYT3Q9BQG1 590 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 GPR35Q9HC97 309 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 PLA2G3Q9NZ20 509 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 LUZP4Q9P127 313 aa10.26□□□□□ -0.77
LIMK1-202ENST00000418310 NOSIPQ9Y314 301 aaKnown RBP10.26□□□□□ -0.77
LIMK1-202ENST00000418310 LOC102723996A0A087X1L8 192 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 C3orf85A0A1B0GTC6 90 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 LINC01387J3KSC0 135 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 NGFP01138 241 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RD3LP0DJH9 198 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RBM11P57052 281 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 B3GALT5-AS1P59052 145 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 HABP2Q14520 560 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 LINC00696Q6ZRV3 163 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 GAPTQ8N292 157 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 TMEM105Q8N8V8 129 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 OR2V1Q8NHB1 315 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 PILRBQ9UKJ0 227 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 MED13Q9UHV7 2174 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 IGKV1D-13A0A0B4J2D9 117 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 TXNL1O43396 289 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 MRPL33O75394 65 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 IGKV1-13P0DP09 117 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 SNCAP37840 140 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RAB5BP61020 215 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ARF1P84077 181 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 EWSR1Q01844 656 aaKnown RBP eCLIP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 IL11RAQ14626 422 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 PMS2CLQ68D20 193 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RNASE11Q8TAA1 199 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 PRRG4Q9BZD6 226 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 PLEKHA2Q9HB19 425 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 KCNJ16Q9NPI9 418 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 CCL28Q9NRJ3 127 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RRP8O43159 456 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 GPR137BO60478 399 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 CST2P09228 141 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF16P17020 682 aaPredicted RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 FUT3P21217 361 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF239Q16600 458 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ACER2Q5QJU3 275 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 RTL6Q6ICC9 239 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF818PQ6ZRF7 136 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 UBAC2Q8NBM4 344 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
LIMK1-202ENST00000418310 WDR54Q9H977 334 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 STARD10Q9Y365 291 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 MMP24Q9Y5R2 645 aa10.25□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF816-ZNF321PA0A0X1KG74 233 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 LRRC3CA6NJW4 275 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 GJE1A6NN92 205 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 SYNGR1O43759 233 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 FKBP2P26885 142 aaKnown RBP10.24□□□□□ -0.77
LIMK1-202ENST00000418310 PLA2G5P39877 138 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 NKX2-1P43699 371 aaPredicted RBP10.24□□□□□ -0.77
LIMK1-202ENST00000418310 FUT6P51993 359 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 VAMP2P63027 116 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 TUSC5Q8IXB3 177 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 DMBX1Q8NFW5 382 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 C12orf49Q9H741 205 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 A0A1W2PR80 420 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF503-AS2A6NEH8 195 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 OR6C6A6NF89 314 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 NUDT19A8MXV4 375 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 WRBO00258 174 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 MPPED1O15442 326 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 NQO2P16083 231 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 SRD5A2P31213 254 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 MRPL21Q7Z2W9 205 aaKnown RBP10.24□□□□□ -0.77
LIMK1-202ENST00000418310 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
LIMK1-202ENST00000418310 KPTNQ9Y664 436 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms