RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
SKA1-203ENST00000417656 ZFHX3Q15911 3703 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 A0A0G2JK05 382 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 M0R1W7 72 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 GEMIN2O14893 280 aaKnown RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 SLC22A1O15245 554 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 OR7C1O76099 320 aaPredicted RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 GTF2F2P13984 249 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 MGMTP16455 207 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 MYL9P24844 172 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 LMO1P25800 156 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 P2RX3P56373 397 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 KLRD1Q13241 179 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 GPR176Q14439 515 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 P2RY14Q15391 338 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 PAN3Q58A45 887 aaKnown RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 TMEM200BQ69YZ2 307 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 METAP1DQ6UB28 335 aaPredicted RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 PDZD9Q8IXQ8 264 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 OR5D13Q8NGL4 314 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 OR6M1Q8NGM8 313 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 LHX4Q969G2 390 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 FOXRED1Q96CU9 486 aaPredicted RBP10.25□□□□□ -0.77
SKA1-203ENST00000417656 COQ2Q96H96 371 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 DMRTB1Q96MA1 342 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 SLC6A7Q99884 636 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 OR51E2Q9H255 320 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 PLGRKTQ9HBL7 147 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 VCX3AQ9NNX9 186 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 ING3Q9NXR8 418 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
SKA1-203ENST00000417656 SMIM30A4D0T7 59 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 TRIM64CA6NLI5 447 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 SLC17A2O00624 439 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 UBBP0CG47 229 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 CD36P16671 472 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 GALP22466 123 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 GADD45AP24522 165 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 HTR2CP28335 458 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 OR10A3P58181 314 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 BLMHQ13867 455 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 TAF9Q16594 264 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 MPV17LQ2QL34 196 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 GPR157Q5UAW9 335 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 OR10K2Q6IF99 312 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 BCL6BQ8N143 479 aaPredicted RBP10.24□□□□□ -0.77
SKA1-203ENST00000417656 BPIFB2Q8N4F0 458 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 CHCHD6Q9BRQ6 235 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 CST11Q9H112 138 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 PCDHB16Q9NRJ7 776 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 TXNL4BQ9NX01 149 aaKnown RBP10.24□□□□□ -0.77
SKA1-203ENST00000417656 SOX21Q9Y651 276 aaPredicted RBP10.24□□□□□ -0.77
SKA1-203ENST00000417656 JMJD1CQ15652 2540 aa10.24□□□□□ -0.77
SKA1-203ENST00000417656 MXRA5Q9NR99 2828 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 TRAV1-2A0A0B4J238 106 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 A0A1W2PPH5 198 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 hADV38S2A0JD32 116 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 RNASEK-C17orf49H0YIS7 233 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 MPIG6BO95866 241 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 IFNA2P01563 188 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 CSN2P05814 226 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 CD37P11049 281 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 GLIPR1P48060 266 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 DLX6P56179 175 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 CLDN12P56749 244 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 SRSF2Q01130 221 aaKnown RBP10.23□□□□□ -0.77
SKA1-203ENST00000417656 MEF2CQ06413 473 aaPredicted RBP10.23□□□□□ -0.77
SKA1-203ENST00000417656 AESQ08117 197 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 UNC119Q13432 240 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 RAB11BQ15907 218 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 KRBOX4Q5JUW0 171 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 ATAD3CQ5T2N8 411 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 TRAPPC6BQ86SZ2 158 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 SUMF2Q8NBJ7 301 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 PLPPR1Q8TBJ4 325 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 SLC25A28Q96A46 364 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 CYYR1Q96J86 154 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 Q96M66 194 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 DPCDQ9BVM2 203 aaPredicted RBP10.23□□□□□ -0.77
SKA1-203ENST00000417656 MS4A7Q9GZW8 240 aaPredicted RBP10.23□□□□□ -0.77
SKA1-203ENST00000417656 IFT22Q9H7X7 185 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 METTL8Q9H825 291 aaKnown RBP10.23□□□□□ -0.77
SKA1-203ENST00000417656 GHRLQ9UBU3 117 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 SSR3Q9UNL2 185 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 V9GY05 133 aa10.23□□□□□ -0.77
SKA1-203ENST00000417656 IGHV1-69DA0A0B4J2H0 117 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 LOC100506127A0A0U1RQW1 187 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 MDFIC2A0A1B0GVS7 189 aa10.22□□□□□ -0.77
SKA1-203ENST00000417656 A0A1W2PRD5 423 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms