RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 UCHL1P09936 223 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 CALRP27797 417 aaKnown RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 TAF9Q16594 264 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 TMEM104Q8NE00 496 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 OR5D13Q8NGL4 314 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 GFI1Q99684 422 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 A0A0U1RQK1 487 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 MGST3O14880 152 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 OR7C1O76099 320 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 BLMHQ13867 455 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 NEDD8Q15843 81 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 PAN3Q58A45 887 aaKnown RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 HCP5Q6MZN7 132 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 ZNF773Q6PK81 442 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 TRAPPC6BQ86SZ2 158 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 SVOPQ8N4V2 548 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 KIR3DL3Q8N743 410 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 ZDHHC22Q8N966 263 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 OR51T1Q8NGJ9 327 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 C17orf50Q8WW18 174 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 COQ2Q96H96 371 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 C1orf147Q96MC9 270 aaPredicted RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 SUCNR1Q9BXA5 334 aa9.8□□□□□ -0.84
NEDD1-202ENST00000411739 METTL8Q9H825 291 aaKnown RBP9.8□□□□□ -0.84
NEDD1-202ENST00000411739 M0R1W7 72 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 CRTAPO75718 401 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-202ENST00000411739 MMP23AO75900 390 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 PRTN3P24158 256 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 LMO1P25800 156 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 GABRA5P31644 462 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 DLX6P56179 175 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 RBM11P57052 281 aaKnown RBP9.79□□□□□ -0.84
NEDD1-202ENST00000411739 HILS1P60008 231 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 BAMBIQ13145 260 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 ATAD3CQ5T2N8 411 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 UBE2UQ5VVX9 321 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 BAIAP2L2Q6UXY1 529 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 RBMS3Q6XE24 437 aaKnown RBP9.79□□□□□ -0.84
NEDD1-202ENST00000411739 Q8NFD4 153 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SHISA3A0PJX4 238 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SMIM30A4D0T7 59 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 ZNF728P0DKX0 622 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 OMGP23515 440 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 P2RX3P56373 397 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 KRBOX4Q5JUW0 171 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SUMF2Q8NBJ7 301 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 PLPPR1Q8TBJ4 325 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SELENOIQ9C0D9 397 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-202ENST00000411739 RHOFQ9HBH0 211 aa9.79□□□□□ -0.84
NEDD1-202ENST00000411739 FAM172BPA6NC97 362 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 GTF2F2P13984 249 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 BMXP51813 675 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 CLDN12P56749 244 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 P2RY14Q15391 338 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 GLT8D1Q68CQ7 371 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-202ENST00000411739 NKAIN3Q8N8D7 197 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 PPP1R35Q8TAP8 253 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 THRSPQ92748 146 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 NDUFB11Q9NX14 153 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 hADV38S2A0JD32 116 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 MEIOCA2RUB1 952 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 DNAJC9-AS1A6NH13 148 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 HOXA3O43365 443 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-202ENST00000411739 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 UTF1Q5T230 341 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 C22orf42Q6IC83 251 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 ZNF714Q96N38 554 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 DPCDQ9BVM2 203 aaPredicted RBP9.78□□□□□ -0.84
NEDD1-202ENST00000411739 C19orf24Q9BVV8 132 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 SLITRK2Q9H156 845 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 KIF25Q9UIL4 384 aa9.78□□□□□ -0.84
NEDD1-202ENST00000411739 DSCAML1Q8TD84 2053 aa9.77□□□□□ -0.84
NEDD1-202ENST00000411739 CCRL2O00421 344 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 NPFFO15130 113 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 MRPS14O60783 128 aaKnown RBP9.77□□□□□ -0.85
NEDD1-202ENST00000411739 MPIG6BO95866 241 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 MGMTP16455 207 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 GDNFP39905 211 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 OR10A3P58181 314 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 TRAM1Q15629 374 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 C1orf122Q6ZSJ8 110 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 C9orf139Q6ZV77 190 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 CHST4Q8NCG5 386 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 TBC1D15Q8TC07 691 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 TMEM158Q8WZ71 300 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 PHYHIPQ92561 330 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 DYRK2Q92630 601 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 PLGRKTQ9HBL7 147 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 MEIKINA0A087WXM9 373 aa9.77□□□□□ -0.85
NEDD1-202ENST00000411739 A0A1W2PPH5 198 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms