RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 DIRC2Q96SL1 478 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 HSPB2A8KAH6 182 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 PRSS44E7EML9 344 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF737O75373 536 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF324O75467 553 aaPredicted RBP9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 MELTFP08582 738 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 FUT7Q11130 342 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 HSPB2Q16082 182 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 UQCC1Q9NVA1 299 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 TRIOBPQ9H2D6 2365 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 CEP290O15078 2479 aa9.98□□□□□ -0.81
PRPF40A-202ENST00000410080 BTF3P20290 206 aaKnown RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 FUT3P21217 361 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 PELI3Q8N2H9 469 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 MRGPRX3Q96LB0 322 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 GFRA3O60609 400 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC38A11Q08AI6 406 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 HERPUD1Q15011 391 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 ARHGAP5-AS1Q96IT6 56 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 GLI3P10071 1580 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 MBTPS2O43462 519 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 CEACAM5P06731 702 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 PTOV1Q86YD1 416 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 C2orf50Q96LR7 162 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 KCNE3Q9Y6H6 103 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF236Q9UL36 1845 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 OOEPA6NGQ2 149 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 RPS19P39019 145 aaKnown RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC37A1P57057 533 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 PPP1R1CQ8WVI7 109 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 CACNG5Q9UF02 275 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 LIMS3P0CW19 117 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 LIMS4P0CW20 117 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 CACNG7P62955 275 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 MIDNQ504T8 468 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 LYG2Q86SG7 212 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 STARD4Q96DR4 205 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 FOXC2Q99958 501 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 WNT16Q9UBV4 365 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC25A10Q9UBX3 287 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 MBD1Q9UIS9 605 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 IGHV3OR16-10A0A075B7F0 116 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 FCN1O00602 326 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 RELBQ01201 579 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 BRWD3Q6RI45 1802 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 PTX4Q96A99 478 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 B9D1Q9UPM9 204 aa9.97□□□□□ -0.81
PRPF40A-202ENST00000410080 PPP1R17O96001 155 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 LHX8Q68G74 356 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 KIRREL2Q6UWL6 708 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 ZNF738Q8NE65 137 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 SLC26A10Q8NG04 563 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 GPR137Q96N19 417 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 SPTY2D1-AS1A0A0U1RR47 76 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 LILRA5A6NI73 299 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 MFNGO00587 321 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 DDOSTP39656 456 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 CLDN18P56856 261 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 PAQR6Q6TCH4 344 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 OR2G2Q8NGZ5 317 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 GON7Q9BXV9 100 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 HYAL3O43820 417 aaPredicted RBP9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 CCKARP32238 428 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 HIKESHIQ53FT3 197 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 OR4S2Q8NH73 311 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 TEX101Q9BY14 249 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 NAA60Q9H7X0 242 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 TMEM30AQ9NV96 361 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 ATP5J2P56134 94 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 C6orf201Q7Z4U5 140 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 PERPQ96FX8 193 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 METTL26Q96S19 204 aa9.96□□□□□ -0.81
PRPF40A-202ENST00000410080 DHRS4L2Q6PKH6 230 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 OR4C16Q8NGL9 310 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 HGDQ93099 445 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 ACER3Q9NUN7 267 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 NPAP1Q9NZP6 1156 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 SLC45A2Q9UMX9 530 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 QSER1Q2KHR3 1735 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 NCKAP5O14513 1909 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 DHRS3O75911 302 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 ETHE1O95571 254 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 IGKV3-20P01619 116 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 RPS4XP62701 263 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 UBE2L3P68036 154 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 CLEC9AQ6UXN8 241 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 OR10A7Q8NGE5 316 aa9.96□□□□□ -0.82
PRPF40A-202ENST00000410080 OR10J6PQ8NGY7 276 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms