RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 OR8G2PQ6IF36 304 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 C6orf201Q7Z4U5 140 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 C1QL2Q7Z5L3 287 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 CA13Q8N1Q1 262 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 RPUSD4Q96CM3 377 aaKnown RBP11.12□□□□□ -0.63
HERC3-203ENST00000407637 OR51I2Q9H344 312 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 VSIRQ9H7M9 311 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 ELL3Q9HB65 397 aaPredicted RBP11.12□□□□□ -0.63
HERC3-203ENST00000407637 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 SZT2Q5T011 3432 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 FOXI3A8MTJ6 420 aaPredicted RBP11.12□□□□□ -0.63
HERC3-203ENST00000407637 CCR2P41597 374 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 UBE2V1Q13404 147 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 CYP2G1PQ6ZSU1 146 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 KMT5CQ86Y97 462 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 CISD2Q8N5K1 135 aaKnown RBP11.12□□□□□ -0.63
HERC3-203ENST00000407637 CMTM2Q8TAZ6 248 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 TBL1XR1Q9BZK7 514 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 TXNIPQ9H3M7 391 aa11.12□□□□□ -0.63
HERC3-203ENST00000407637 TMEM131Q92545 1883 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 ANKUB1A6NFN9 424 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 TSPAN2O60636 221 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 CBR3O75828 277 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 SLC35E2P0CK97 266 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 ANOS1P23352 680 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 NKX2-1P43699 371 aaPredicted RBP11.11□□□□□ -0.63
HERC3-203ENST00000407637 MTCP1P56278 107 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 CLDN17P56750 224 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 PRDX4Q13162 271 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 KLHL24Q6TFL4 600 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 FAM89BQ8N5H3 189 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 GABRG3Q99928 467 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 VPS25Q9BRG1 176 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 TMEM9BQ9NQ34 198 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 TUBG2Q9NRH3 451 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 DECR2Q9NUI1 292 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 RTTNQ86VV8 2226 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 SERPINE3A8MV23 424 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 PPBPP02775 128 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 TAS2R30P59541 319 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 ABHD12BQ7Z5M8 362 aaPredicted RBP11.11□□□□□ -0.63
HERC3-203ENST00000407637 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 P2RX4Q99571 388 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 MANBALQ9NQG1 85 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
HERC3-203ENST00000407637 IGKV1D-43A0A0B4J1Z2 117 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ZNF850A8MQ14 1090 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 TGFBR3LH3BV60 316 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 TYMSP04818 313 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 HLA-DOBP13765 273 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 P2RY2P41231 377 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 RRADP55042 308 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 CARD18P57730 90 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 FNDC7Q5VTL7 733 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 FAM57BQ71RH2 274 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 SLAMF6Q96DU3 332 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 RSG1Q9BU20 258 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 CLDN16Q9Y5I7 305 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 CDS2O95674 445 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 TMEM50AO95807 157 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 UBE2NP61088 152 aaKnown RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 FAM189A2Q15884 450 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 EXT1Q16394 746 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 SGCBQ16585 318 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 C16orf52Q8NHV5 167 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ATP5SQ99766 215 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 HSPB9Q9BQS6 159 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
HERC3-203ENST00000407637 FAM60AQ9NP50 221 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 TRAPPC1Q9Y5R8 145 aa11.1□□□□□ -0.63
HERC3-203ENST00000407637 TRAV36DV7A0A075B6V5 113 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 H0YGG7 62 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 HCRTR2O43614 444 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 KBTBD11O94819 623 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 C8AP07357 584 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms