RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 DYNC1I1O14576 645 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PFDN6O15212 129 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PSTPIP1O43586 416 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 SCELO95171 688 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 STAG3L3P0CL85 134 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CD28P10747 220 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 TCN1P20061 433 aaPredicted RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 LEPP41159 167 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PPICP45877 212 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PLP1P60201 277 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CDK16Q00536 496 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 ACVR1Q04771 509 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CDH17Q12864 832 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 ARL6IP1Q15041 203 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 TRIP13Q15645 432 aaPredicted RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 MICBQ29980 383 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 VPS26BQ4G0F5 336 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 SAMD4BQ5PRF9 694 aaKnown RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 CPTPQ5TA50 214 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 DUPD1Q68J44 220 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 TMIGD1Q6UXZ0 262 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CYHR1Q6ZMK1 362 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 C19orf35Q6ZS72 473 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 SPICQ8N5J4 248 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 COMMD1Q8N668 190 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PRELID2Q8N945 189 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 Q8N9L7 120 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 ACOT4Q8N9L9 421 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 BPIFCQ8NFQ6 507 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR4C5Q8NGB2 326 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR52H1Q8NGJ2 320 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR52K1Q8NGK4 314 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR4C13Q8NGP0 309 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 DOK4Q8TEW6 326 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 TSEN15Q8WW01 171 aaKnown RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 PEX13Q92968 403 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 TMBIM1Q969X1 311 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PLEKHA8Q96JA3 519 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 BIRC8Q96P09 236 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CNN2Q99439 309 aaKnown RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 RNF2Q99496 336 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 ZNF717Q9BY31 904 aaPredicted RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR51J1Q9H342 316 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 ANKRD19PQ9H560 264 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 RANBP3Q9H6Z4 567 aaPredicted RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 INPP5EQ9NRR6 644 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 LYARQ9NX58 379 aaKnown RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 THUMPD1Q9NXG2 353 aaKnown RBP2.28□□□□□ -2.04
RPA3-203ENST00000401447 UBAP1Q9NZ09 502 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 CD274Q9NZQ7 290 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 EMC3Q9P0I2 261 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 OR1A1Q9P1Q5 309 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 RWDD2AQ9UIY3 292 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 PITPNC1Q9UKF7 332 aa2.28□□□□□ -2.04
RPA3-203ENST00000401447 LOC100131303A0A0U1RQF7 123 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 KIR2DS1A0A191URI9 304 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 ISPDA4D126 451 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 E5RI56 91 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 CA11O75493 328 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 EEDO75530 441 aaKnown RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 H6PDO95479 791 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 LALBAP00709 142 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 CST1P01037 141 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 CRYGBP07316 175 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 C8GP07360 202 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 OR8U8P0C7N1 319 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 CECR9P0C854 216 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 IL12BP29460 328 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 CALCRP30988 508 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 RRM2P31350 389 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 EVI2BP34910 448 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 GLRXP35754 106 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 EIF1P41567 113 aaKnown RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 HNRNPA3P51991 378 aaKnown RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 TFDP2Q14188 446 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 GK3PQ14409 553 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 OXA1LQ15070 435 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 NNATQ16517 81 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 DUSP7Q16829 419 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 LRRC36Q1X8D7 754 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 KHDRBS2Q5VWX1 349 aaKnown RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 TTC19Q6DKK2 380 aaPredicted RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 PGAP1Q75T13 922 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 GDPD3Q7L5L3 318 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 SSX9Q7RTT3 188 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 ZNF101Q8IZC7 436 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 DNAJA4Q8WW22 397 aaPredicted RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 DCUN1D4Q92564 292 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 ZNF75CPQ92670 426 aaPredicted RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 UFD1Q92890 307 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 HAVCR1Q96D42 359 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 ITCHQ96J02 903 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 ZNF317Q96PQ6 595 aaPredicted RBP2.27□□□□□ -2.05
RPA3-203ENST00000401447 QKIQ96PU8 341 aaKnown RBP eCLIP2.27□□□□□ -2.05
RPA3-203ENST00000401447 OR4K3Q96R72 315 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 RBBP8Q99708 897 aa2.27□□□□□ -2.05
RPA3-203ENST00000401447 RHOXF2Q9BQY4 288 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms