RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CXorf66Q5JRM2 361 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-203ENST00000397378 SPIN3Q5JUX0 258 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 SLC25A26Q70HW3 274 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 PGAM4Q8N0Y7 254 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR8H3Q8N146 312 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 FAM58AQ8N1B3 248 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 BBS1Q8NFJ9 593 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR10G2Q8NGC3 310 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR4D6Q8NGJ1 314 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR56B4Q8NH76 319 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 TOMM40LQ969M1 308 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 FEVQ99581 238 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 SPATA25Q9BR10 227 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 MAGIXQ9H6Y5 334 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 OR52A1Q9UKL2 312 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 IKZF2Q9UKS7 526 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 BLOC1S6Q9UL45 172 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 COPS3Q9UNS2 423 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 AMMECR1Q9Y4X0 333 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-203ENST00000397378 R4GMQ9 66 aa7.35□□□□□ -1.23
NEDD9-203ENST00000397378 TRIM64CA6NLI5 447 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 ZNF729A6NN14 1252 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 ENTPD6O75354 484 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GATBO75879 557 aaKnown RBP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 INMTO95050 263 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 CSN2P05814 226 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 ELANEP08246 267 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 DUSP1P28562 367 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 PTGFRP43088 359 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GLIPR1P48060 266 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 NPBWR2P48146 333 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 RAB7AP51149 207 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 ACTR3P61158 418 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GPR50Q13585 617 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 APOFQ13790 326 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 HES1Q14469 280 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 RBM39Q14498 530 aaKnown RBP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 BCL2L15Q5TBC7 163 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 RPP25LQ8N5L8 163 aaKnown RBP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GIPC3Q8TF64 312 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 C4orf3Q8WVX3 66 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GIMAP1Q8WWP7 306 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 BORCS8Q96FH0 119 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 HRASLS5Q96KN8 279 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 CHST5Q9GZS9 411 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 RBFOX1Q9NWB1 397 aaKnown RBP7.34□□□□□ -1.23
NEDD9-203ENST00000397378 ACTR3BQ9P1U1 418 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 GTF2A1LQ9UNN4 478 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 SNX5Q9Y5X3 404 aa7.34□□□□□ -1.23
NEDD9-203ENST00000397378 TCRBV5S2A0A599 114 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 ODAMA1E959 279 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 CCDC182A6NF36 153 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 LINC01548A6NM66 108 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 J3QR06 171 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 SH2D1BO14796 132 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 OR2H2O95918 312 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 CYB5AP00167 134 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 MRPL3P09001 348 aaKnown RBP7.33□□□□□ -1.24
NEDD9-203ENST00000397378 GP9P14770 177 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 PRKACAP17612 351 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 BCL3P20749 454 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 ATP6V1B2P21281 511 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 GPR12P47775 334 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 AESQ08117 197 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 MADCAM1Q13477 382 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 EBI3Q14213 229 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 HNF4GQ14541 408 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 C17orf58Q2M2W7 97 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 UTF1Q5T230 341 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF322Q6U7Q0 402 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-203ENST00000397378 CYP2R1Q6VVX0 501 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 ZNF429Q86V71 674 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 TGIF2LXQ8IUE1 241 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 CCDC54Q8NEL0 328 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 DNAAF1Q8NEP3 725 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 C10orf35Q96D05 121 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 KIRREL1Q96J84 757 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 MNTQ99583 582 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 APOL4Q9BPW4 351 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 TTTY10Q9BZA0 68 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 ABCG5Q9H222 651 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 PLEKHA1Q9HB21 404 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 HMG20AQ9NP66 347 aa7.33□□□□□ -1.24
NEDD9-203ENST00000397378 LIN7CQ9NUP9 197 aaKnown RBP7.33□□□□□ -1.24
NEDD9-203ENST00000397378 KBTBD11-OT1A0A1B0GTJ5 212 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 ERICH4A6NGS2 130 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 SIRPB1O00241 398 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 SERPINA3P01011 423 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 IGKV1D-33P01593 117 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 IGKV1-33P01594 117 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 IGHG4P01861 327 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 OR8U8P0C7N1 319 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 CGB3P0DN86 165 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 CGB7P0DN87 165 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 IGHV4-30-4P0DP06 118 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 OSMP13725 252 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 SPNP16150 400 aa7.32□□□□□ -1.24
NEDD9-203ENST00000397378 NFYBP25208 207 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms