RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 PLEKHG7Q6ZR37 379 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 OVCH2Q7RTZ1 564 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 EXOSC4Q9NPD3 245 aaKnown RBP11.71□□□□□ -0.53
SEC13-206ENST00000397102 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 SH2D1BO14796 132 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 MAGEB4O15481 346 aaPredicted RBP11.7□□□□□ -0.54
SEC13-206ENST00000397102 IGKV1D-33P01593 117 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 IGKV1-33P01594 117 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 CSN2P05814 226 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 FRMD6-AS1P0C7T7 363 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 CALCBP10092 127 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 OSMP13725 252 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 NFYBP25208 207 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 GPR12P47775 334 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 RAB7AP51149 207 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 CXCR4P61073 352 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 CNN2Q99439 309 aaKnown RBP11.7□□□□□ -0.54
SEC13-206ENST00000397102 TEX12Q9BXU0 123 aa11.7□□□□□ -0.54
SEC13-206ENST00000397102 J3QR06 171 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 SYT7O43581 403 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 SASH3O75995 380 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 SERPINA3P01011 423 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 POU3F4P49335 361 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 RBP2P50120 134 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 ATP1B3P54709 279 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 MADCAM1Q13477 382 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 FAM98BQ52LJ0 330 aaKnown RBP11.69□□□□□ -0.54
SEC13-206ENST00000397102 KRBOX4Q5JUW0 171 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 FAM27D1Q5T7N8 215 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 ADAMTSL5Q6ZMM2 481 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 DNAAF1Q8NEP3 725 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 ISOC1Q96CN7 298 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 COQ2Q96H96 371 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 MNTQ99583 582 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 ABCG5Q9H222 651 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 SLC25A19Q9HC21 320 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
SEC13-206ENST00000397102 MRM2Q9UI43 246 aaKnown RBP11.69□□□□□ -0.54
SEC13-206ENST00000397102 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
SEC13-206ENST00000397102 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 KBTBD11-OT1A0A1B0GTJ5 212 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 H3BSH0 61 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 EBI3Q14213 229 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 ODF4Q2M2E3 257 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 TMEM236Q5W0B7 351 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 C16orf89Q6UX73 402 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 DEFB107AQ8IZN7 70 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 CCDC54Q8NEL0 328 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 C10orf35Q96D05 121 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 RNFT2Q96EX2 444 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 COMMD4Q9H0A8 199 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 NDE1Q9NXR1 346 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
SEC13-206ENST00000397102 RRP9O43818 475 aaKnown RBP11.67□□□□□ -0.54
SEC13-206ENST00000397102 IGHG4P01861 327 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 HCKP08631 526 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 OR8U8P0C7N1 319 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 ZNF44P15621 663 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 CFHR3Q02985 330 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 ZNF429Q86V71 674 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 SLC35F2Q8IXU6 374 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 HAVCR2Q8TDQ0 301 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 PP6455Q8WZ26 134 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 ZNF556Q9HAH1 456 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 ARGLU1Q9NWB6 273 aaPredicted RBP11.67□□□□□ -0.54
SEC13-206ENST00000397102 ING3Q9NXR8 418 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 TVP23BQ9NYZ1 205 aa11.67□□□□□ -0.54
SEC13-206ENST00000397102 NCBP2LA6PVI3 153 aaKnown RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 ZNF670-ZNF695F2Z2N8 137 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 RPP14O95059 124 aaKnown RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 CST1P01037 141 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 CGB3P0DN86 165 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 CGB7P0DN87 165 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 MTCP1P56278 107 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 BNIP1Q12981 228 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 ATXN7L3Q14CW9 347 aaPredicted RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 CATSPERDQ86XM0 798 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 Q8N9W7 124 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 CHST4Q8NCG5 386 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 LEAP2Q969E1 77 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 ADI1Q9BV57 179 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
SEC13-206ENST00000397102 ADGRL4Q9HBW9 690 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 ISYNA1Q9NPH2 558 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 PSG11Q9UQ72 335 aa11.66□□□□□ -0.54
SEC13-206ENST00000397102 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms