RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 LINC00614P0C842 121 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 FCGR2AP12318 317 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 ASCL1P50553 236 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 RAB7AP51149 207 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 FOXC1Q12948 553 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 ZNF880Q6PDB4 577 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 DPPA3Q6W0C5 159 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 NPEPL1Q8NDH3 523 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 OR5L1Q8NGL2 311 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 OR52N5Q8NH56 324 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 OR51F2Q8NH61 342 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 ADAMTS17Q8TE56 1095 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 RNF128Q8TEB7 428 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 SARAFQ96BY9 339 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 GNPNAT1Q96EK6 184 aaPredicted RBP5.01□□□□□ -1.61
RFFL-202ENST00000394597 BORCS8Q96FH0 119 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 PLEKHJ1Q9NW61 149 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 FUT9Q9Y231 359 aa5.01□□□□□ -1.61
RFFL-202ENST00000394597 NBASA2RRP1 2371 aa5□□□□□ -1.61
RFFL-202ENST00000394597 LIPT2A6NK58 231 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZNF814B7Z6K7 855 aa5□□□□□ -1.61
RFFL-202ENST00000394597 C1QL1O75973 258 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZIC2O95409 532 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 APOA2P02652 100 aa5□□□□□ -1.61
RFFL-202ENST00000394597 PGA3P0DJD8 388 aa5□□□□□ -1.61
RFFL-202ENST00000394597 GNB3P16520 340 aa5□□□□□ -1.61
RFFL-202ENST00000394597 EPHA1P21709 976 aa5□□□□□ -1.61
RFFL-202ENST00000394597 CHRNB4P30926 498 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZFP36L1Q07352 338 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 ENDOGQ14249 297 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 PCOLCEQ15113 449 aa5□□□□□ -1.61
RFFL-202ENST00000394597 DCAF10Q5QP82 559 aa5□□□□□ -1.61
RFFL-202ENST00000394597 GFI1BQ5VTD9 330 aa5□□□□□ -1.61
RFFL-202ENST00000394597 VHLLQ6RSH7 139 aa5□□□□□ -1.61
RFFL-202ENST00000394597 VASH2Q86V25 355 aa5□□□□□ -1.61
RFFL-202ENST00000394597 OTOSQ8NHW6 89 aa5□□□□□ -1.61
RFFL-202ENST00000394597 FGGYQ96C11 551 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ABHD6Q9BV23 337 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZDHHC11Q9H8X9 412 aa5□□□□□ -1.61
RFFL-202ENST00000394597 SEMA5BQ9P283 1151 aa5□□□□□ -1.61
RFFL-202ENST00000394597 OSGIN2Q9Y236 505 aa5□□□□□ -1.61
RFFL-202ENST00000394597 MKRN2OSH3BPM6 223 aa5□□□□□ -1.61
RFFL-202ENST00000394597 NTN3O00634 580 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BKO60814 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 RAD51DO75771 328 aa5□□□□□ -1.61
RFFL-202ENST00000394597 EPPINO95925 133 aa5□□□□□ -1.61
RFFL-202ENST00000394597 CYB5R3P00387 301 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 TTRP02766 147 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BJP06899 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 CELA2AP08217 269 aa5□□□□□ -1.61
RFFL-202ENST00000394597 KLK2P20151 261 aa5□□□□□ -1.61
RFFL-202ENST00000394597 TBPP20226 339 aa5□□□□□ -1.61
RFFL-202ENST00000394597 NTF3P20783 257 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BOP23527 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BBP33778 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 GALR1P47211 349 aa5□□□□□ -1.61
RFFL-202ENST00000394597 MEOX1P50221 254 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BDP58876 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BCP62807 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST2H2BEQ16778 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST2H2BFQ5QNW6 126 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 GVQW1Q8N7I0 195 aa5□□□□□ -1.61
RFFL-202ENST00000394597 NOXO1Q8NFA2 376 aa5□□□□□ -1.61
RFFL-202ENST00000394597 OR5R1Q8NH85 324 aa5□□□□□ -1.61
RFFL-202ENST00000394597 APOBEC4Q8WW27 367 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 C11orf40Q8WZ69 217 aa5□□□□□ -1.61
RFFL-202ENST00000394597 EMG1Q92979 244 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BHQ93079 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 DMRTA2Q96SC8 542 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BNQ99877 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 HIST1H2BMQ99879 126 aa5□□□□□ -1.61
RFFL-202ENST00000394597 AKIRIN1Q9H9L7 192 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 MSL2Q9HCI7 577 aa5□□□□□ -1.61
RFFL-202ENST00000394597 OR5AC2Q9NZP5 309 aa5□□□□□ -1.61
RFFL-202ENST00000394597 NAGKQ9UJ70 344 aa5□□□□□ -1.61
RFFL-202ENST00000394597 TIMM10BQ9Y5J6 103 aa5□□□□□ -1.61
RFFL-202ENST00000394597 TRAPPC1Q9Y5R8 145 aa5□□□□□ -1.61
RFFL-202ENST00000394597 DOCK9Q9BZ29 2069 aa5□□□□□ -1.61
RFFL-202ENST00000394597 PCNTO95613 3336 aa5□□□□□ -1.61
RFFL-202ENST00000394597 TRGV5A0A0B4J1U4 118 aa5□□□□□ -1.61
RFFL-202ENST00000394597 A0A0G2JK05 382 aa5□□□□□ -1.61
RFFL-202ENST00000394597 MDFIC2A0A1B0GVS7 189 aa5□□□□□ -1.61
RFFL-202ENST00000394597 B4DEV8 164 aa5□□□□□ -1.61
RFFL-202ENST00000394597 H0YL77 283 aa5□□□□□ -1.61
RFFL-202ENST00000394597 FGF16O43320 207 aa5□□□□□ -1.61
RFFL-202ENST00000394597 SFT2D2O95562 160 aa5□□□□□ -1.61
RFFL-202ENST00000394597 IGHV3-9P01782 118 aa5□□□□□ -1.61
RFFL-202ENST00000394597 COX6A1P12074 109 aa5□□□□□ -1.61
RFFL-202ENST00000394597 PSMB3P49720 205 aa5□□□□□ -1.61
RFFL-202ENST00000394597 EFNB2P52799 333 aa5□□□□□ -1.61
RFFL-202ENST00000394597 BPIFB3P59826 476 aa5□□□□□ -1.61
RFFL-202ENST00000394597 RPS23P62266 143 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 INSM1Q01101 510 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 RBPJQ06330 500 aa5□□□□□ -1.61
RFFL-202ENST00000394597 PNRC1Q12796 327 aaPredicted RBP5□□□□□ -1.61
RFFL-202ENST00000394597 CNN3Q15417 329 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 TMEM268Q5VZI3 342 aa5□□□□□ -1.61
RFFL-202ENST00000394597 ZNF787Q6DD87 383 aa5□□□□□ -1.61
RFFL-202ENST00000394597 MRPL14Q6P1L8 145 aaKnown RBP5□□□□□ -1.61
RFFL-202ENST00000394597 FAHD2BQ6P2I3 314 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms