RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF780BQ9Y6R6 833 aa10.92□□□□□ -0.66
SLC28A1-203ENST00000394573 LOC107986453A0A1B0GWG9 222 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 RNF212BA8MTL3 300 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ST8SIA3O43173 380 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 SYNGR4O95473 234 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 SFTPDP35247 375 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 CEACAM3P40198 252 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF83P51522 516 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 DYNLT3P51808 116 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 NTHL1P78549 312 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 CDC42EP1Q00587 391 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF266Q14584 549 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 MSMO1Q15800 293 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 HLA-BQ31612 363 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ITPRIPL2Q3MIP1 535 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 KIAA1644Q3SXP7 199 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 PHLDA2Q53GA4 152 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 LHFPL1Q86WI0 220 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 EMG1Q92979 244 aaKnown RBP10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ALG14Q96F25 216 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 RYDENQ9NUL5 291 aaKnown RBP10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 COL4A5P29400 1685 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 IGKV1D-8A0A087WSZ0 117 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF878C9JN71 531 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 P2RY10O00398 339 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 OR7C2O60412 319 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 UBE2NP61088 152 aaKnown RBP10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF117Q03924 483 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 SLC48A1Q6P1K1 146 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 BAGE3Q86Y29 109 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 BAGE2Q86Y30 109 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF440Q8IYI8 595 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 OR2C3Q8N628 320 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 Q8N976 141 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 OR11L1Q8NGX0 322 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 ST6GALNAC6Q969X2 333 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 RSPRY1Q96DX4 576 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 RTN4RQ9BZR6 473 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 PLSCR4Q9NRQ2 329 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 RBPJLQ9UBG7 517 aa10.91□□□□□ -0.66
SLC28A1-203ENST00000394573 SSSCA1O60232 199 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 CTHRC1Q96CG8 243 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 FAM60AQ9NP50 221 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 RTTNQ86VV8 2226 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 CEACAM18A8MTB9 384 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 SEMA4FO95754 770 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 HIST1H1TP22492 207 aaPredicted RBP10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 TMEM50BP56557 158 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF154Q13106 437 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 FAM53BQ14153 422 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 GNMTQ14749 295 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 SP5Q6BEB4 398 aaPredicted RBP10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 ZNF519Q8TB69 540 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 SLAMF6Q96DU3 332 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 CISD1Q9NZ45 108 aaKnown RBP10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 PAPPA2Q9BXP8 1791 aa10.9□□□□□ -0.66
SLC28A1-203ENST00000394573 FREM3P0C091 2139 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 CYR61O00622 381 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 HBE1P02100 147 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 CPMP14384 443 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 SELPP16109 830 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 APOBEC3AP31941 199 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 CD70P32970 193 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 SLC6A8P48029 635 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 PIGPP57054 158 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 FXYD4P59646 89 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RPS4XP62701 263 aaKnown RBP10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RHOGP84095 191 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RELBQ01201 579 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RBPJQ06330 500 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 DCAF4L2Q8NA75 395 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 OR8G5Q8NG78 346 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 ZDHHC11Q9H8X9 412 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RPRMQ9NS64 109 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 CES1P1Q9UKY3 287 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 GJE1A6NN92 205 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 PMCHP20382 165 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 C1orf100Q5SVJ3 147 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 C1orf140Q5VVS0 124 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 TXNDC8Q6A555 127 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RSPO2Q6UXX9 243 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 ZNF681Q96N22 645 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 RHBDD3Q9Y3P4 386 aa10.89□□□□□ -0.67
SLC28A1-203ENST00000394573 H3BP45 60 aa10.88□□□□□ -0.67
SLC28A1-203ENST00000394573 ARPC3O15145 178 aa10.88□□□□□ -0.67
SLC28A1-203ENST00000394573 HIST1H1DP16402 221 aaKnown RBP10.88□□□□□ -0.67
SLC28A1-203ENST00000394573 CBLN1P23435 193 aa10.88□□□□□ -0.67
SLC28A1-203ENST00000394573 GABRA3P34903 492 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms