RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 OIT3Q8WWZ8 545 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 KIAA1456Q9P272 454 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 MTCH2Q9Y6C9 303 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 F6UZH7 168 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 MS4A18H0YCH9 400 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 VDAC1P21796 283 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 HABP2Q14520 560 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 MS4A18Q3C1V0 323 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 C9orf50Q5SZB4 431 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 VASH2Q86V25 355 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 AGBL5Q8NDL9 886 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 PINX1Q96BK5 328 aaKnown RBP11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 KCNK17Q96T54 332 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 IGHV1OR21-1A0A087WYE8 117 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 CCL2P13500 99 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 GLB1P16278 677 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 KRTDAPP60985 99 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 IL24Q13007 206 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 RAB35Q15286 201 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 SHHQ15465 462 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 BORCS7Q96B45 105 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 RAB40CQ96S21 281 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 DUSP23Q9BVJ7 150 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 STARD10Q9Y365 291 aa11.51□□□□□ -0.57
TRAPPC9-201ENST00000389328 TERTO14746 1132 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 DANCRP0C864 163 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FCARP24071 287 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 RND3P61587 244 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 RSPO4Q2I0M5 234 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 ANKRD37Q7Z713 158 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 LRRC75AQ8NAA5 344 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CHST5Q9GZS9 411 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PARD6AQ9NPB6 346 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 BOKQ9UMX3 212 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 LRP5LA4QPB2 252 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 GABRA4P48169 554 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 C21orf62-AS1Q17RA5 79 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 ATP5SQ99766 215 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FAM117AQ9C073 453 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PRSS50Q9UI38 385 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 DMRT1Q9Y5R6 373 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 ICE1Q9Y2F5 2266 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 IGKV1D-43A0A0B4J1Z2 117 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CDS2O95674 445 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PGA5P0DJD9 388 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PPP1CBP62140 327 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 TGFBR3Q03167 851 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 LPAL2Q16609 132 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CRIPAKQ8N1N5 446 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CLDN23Q96B33 292 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 DMRTA2Q96SC8 542 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 LHFPL6Q9Y693 200 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FGF16O43320 207 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 OR8U8P0C7N1 319 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 SLC25A6P12236 298 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 CLDN15P56746 228 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 ARG2P78540 354 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 SPATA46Q5T0L3 261 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 HIPK2Q9H2X6 1198 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 MSL2Q9HCI7 577 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
TRAPPC9-201ENST00000389328 FCGR3AP08637 254 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 GALNSP34059 522 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF92Q03936 586 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ZNF600Q6ZNG1 722 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 C1QL2Q7Z5L3 287 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 NAT6Q93015 286 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 FAM166BA8MTA8 275 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 TSPAN2O60636 221 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 CST2P09228 141 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 DDTP30046 118 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 ACOT6Q3I5F7 207 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 PRAMEF6Q5VXH4 476 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 SLC22A18ASQ8N1D0 253 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 CACNA1DQ01668 2161 aa11.49□□□□□ -0.57
TRAPPC9-201ENST00000389328 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms