RNA–Protein interactions for RNA: ENST00000384245.1

RNU6-17P-201, Transcript of RNA, U6 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU6-17P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-17P-201ENST00000384245 PLXNA2O75051 1894 aa0.8□□□□□ -2.28
RNU6-17P-201ENST00000384245 OBSL1O75147 1896 aa0.8□□□□□ -2.28
RNU6-17P-201ENST00000384245 CHD3Q12873 2000 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 DCHS2Q6V1P9 2916 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 ZGRF1Q86YA3 2104 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CCDC169A6NNP5 214 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 M0R1X1 148 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 KPNA3O00505 521 aaPredicted RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SCAMP2O15127 329 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 PIN1P1O15428 100 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 RNF113AO15541 343 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 AQP9O43315 295 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 DNAJB6O75190 326 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 HMMRO75330 724 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SCO1O75880 301 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 AQP8O94778 261 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 FSTL3O95633 263 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 PTMAP06454 111 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CCL4P13236 92 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CTRB1P17538 263 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 HLA-DMAP28067 261 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SRP14P37108 136 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 RPS15P62841 145 aaKnown RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SELENBP1Q13228 472 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 ITGB3BPQ13352 177 aaPredicted RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 TRAM2Q15035 370 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CST6Q15828 149 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CEP55Q53EZ4 464 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 AMMECR1LQ6DCA0 310 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 XKRXQ6PP77 449 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 Q6ZSR6 202 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 OTUD6AQ7L8S5 288 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SLC16A14Q7RTX9 510 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 TMEM25Q86YD3 366 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 BBS7Q8IWZ6 715 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 DRAM1Q8N682 238 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 ST6GALNAC3Q8NDV1 305 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 LY6G5BQ8NDX9 201 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 C19orf18Q8NEA5 215 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SGMS2Q8NHU3 365 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 MUC7Q8TAX7 377 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 SPPL2BQ8TCT7 592 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 ACMSDQ8TDX5 336 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 ITLN2Q8WWU7 325 aaPredicted RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 FBXO32Q969P5 355 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 RERGQ96A58 199 aaPredicted RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CSPG4P5Q96PW8 444 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CCL19Q99731 98 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 KCNS3Q9BQ31 491 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CENPKQ9BS16 269 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 CRACR2AQ9BSW2 395 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 METTL7AQ9H8H3 244 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 RRAGDQ9NQL2 400 aaPredicted RBP0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 DCAF16Q9NXF7 216 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 PLXND1Q9Y4D7 1925 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 AKAP9Q99996 3911 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 TENM1Q9UKZ4 2725 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 UNC13CQ8NB66 2214 aa0.79□□□□□ -2.28
RNU6-17P-201ENST00000384245 TACC2O95359 2948 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 PTPRDP23468 1912 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 TCHHQ07283 1943 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CITO14578 2027 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 MDC1Q14676 2089 aaKnown RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 IGLV10-54A0A075B6I4 117 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 IGHV3OR16-9A0A0B4J2B5 98 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CENPBD1B2RD01 187 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 C9J4A7 227 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 C19orf84I3L1E1 186 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 SIRPB1O00241 398 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 GABRPO00591 440 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 OVOL1O14753 267 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CASC3O15234 703 aaKnown RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 EIF3HO15372 352 aaKnown RBP eCLIP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 TCF21O43680 179 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CACNG3O60359 315 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 SLC19A2O60779 497 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CCDC22O60826 627 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 HUS1O60921 280 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 FGFR1OPO95684 399 aaKnown RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CXCL8P10145 99 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 NELFEP18615 380 aaKnown RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 GGT2P36268 569 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 TAGLN2P37802 199 aaKnown RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 MLF1P58340 268 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 PSMC5P62195 406 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 ELOCQ15369 112 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 ZNF141Q15928 474 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 ZNF829Q3KNS6 432 aaPredicted RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 GCSAMLQ5JQS6 135 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CPTPQ5TA50 214 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 ZNF660Q6AZW8 331 aaPredicted RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 ZFAND6Q6FIF0 208 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 C22orf42Q6IC83 251 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 MORN3Q6PF18 240 aaPredicted RBP0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 CD300LGQ6UXG3 332 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 GKN2Q86XP6 184 aa0.78□□□□□ -2.28
RNU6-17P-201ENST00000384245 RAB43Q86YS6 212 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms