RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 SPCS2Q15005 226 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 SIGIRRQ6IA17 410 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 FAM89BQ8N5H3 189 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 PTX4Q96A99 478 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 DACT3Q96B18 629 aaPredicted RBP12.81□□□□□ -0.36
PDGFB-202ENST00000381551 ISOC1Q96CN7 298 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 SMR3AQ99954 134 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 TMEM59Q9BXS4 323 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 BARHL1Q9BZE3 327 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 RBM38Q9H0Z9 239 aaKnown RBP12.81□□□□□ -0.36
PDGFB-202ENST00000381551 LPAR5Q9H1C0 372 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 MMP26Q9NRE1 261 aa12.81□□□□□ -0.36
PDGFB-202ENST00000381551 CSPG4Q6UVK1 2322 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 PPIAL4CA0A0B4J2A2 164 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 C22orf46C9J442 243 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 H3BMQ9 156 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 CD5LO43866 347 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 PAHP00439 452 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 SNRPBP14678 240 aaKnown RBP12.8□□□□□ -0.36
PDGFB-202ENST00000381551 RAB6AP20340 208 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 RORCP51449 518 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 EFNB2P52799 333 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 GRK1Q15835 563 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 SUMF2Q8NBJ7 301 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 RAB40AQ8WXH6 277 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 TMEM186Q96B77 213 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 NICN1Q9BSH3 213 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 DCTN5Q9BTE1 182 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
PDGFB-202ENST00000381551 MRI1Q9BV20 369 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 CHST6Q9GZX3 395 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 ABRACLQ9P1F3 81 aa12.8□□□□□ -0.36
PDGFB-202ENST00000381551 RCC2Q9P258 522 aaKnown RBP12.8□□□□□ -0.36
PDGFB-202ENST00000381551 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 TRAV20A0A0B4J274 112 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 KIR2DS1A0A191URI9 304 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 DPPA5A6NC42 116 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 H3BUI4 141 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 MGST3O14880 152 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 LY6G6DO95868 133 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 FUT3P21217 361 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 DVL1P1P54792 670 aaPredicted RBP12.79□□□□□ -0.36
PDGFB-202ENST00000381551 SCAND1P57086 179 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 PAN3Q58A45 887 aaKnown RBP12.79□□□□□ -0.36
PDGFB-202ENST00000381551 ATAD3CQ5T2N8 411 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 BIVMQ86UB2 503 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 BPIFB2Q8N4F0 458 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 LY6G5BQ8NDX9 201 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 OR5H6Q8NGV6 325 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 DPCDQ9BVM2 203 aaPredicted RBP12.79□□□□□ -0.36
PDGFB-202ENST00000381551 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 SPACA1Q9HBV2 294 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 HIF1ANQ9NWT6 349 aa12.79□□□□□ -0.36
PDGFB-202ENST00000381551 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
PDGFB-202ENST00000381551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 SMIM31A0A1B0GVY4 71 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 SOCS1O15524 211 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 NOL3O60936 208 aaKnown RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 CSN2P05814 226 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 GLAP06280 429 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 TMEM50BP56557 158 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 FAM189A2Q15884 450 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 RAB12Q6IQ22 244 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 GDPD3Q7L5L3 318 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 GLCCI1Q86VQ1 547 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 OR4M1Q8NGD0 313 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 C8orf46Q8TAG6 207 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 H1FXQ92522 213 aaKnown RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 DMRTB1Q96MA1 342 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 NUDT16L1Q9BRJ7 211 aaKnown RBP12.78□□□□□ -0.36
PDGFB-202ENST00000381551 SPATA2Q9UM82 520 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 INSIG2Q9Y5U4 225 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 PEX16Q9Y5Y5 336 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 ETV7Q9Y603 341 aa12.78□□□□□ -0.36
PDGFB-202ENST00000381551 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 CCDC160A6NGH7 325 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 HSPB6O14558 160 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 LIPFP07098 398 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 ZNF16P17020 682 aaPredicted RBP12.77□□□□□ -0.37
PDGFB-202ENST00000381551 ZNF182P17025 639 aaPredicted RBP12.77□□□□□ -0.37
PDGFB-202ENST00000381551 BLVRBP30043 206 aaPredicted RBP12.77□□□□□ -0.37
PDGFB-202ENST00000381551 KCNJ3P48549 501 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 VEGFCP49767 419 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
PDGFB-202ENST00000381551 PAX5Q02548 391 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 AESQ08117 197 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 TMEM200BQ69YZ2 307 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 OR56B1Q8NGI3 324 aa12.77□□□□□ -0.37
PDGFB-202ENST00000381551 DYNC2LI1Q8TCX1 351 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms