RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SLC33A1O00400 549 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 CDRT1O95170 752 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 RBP4P02753 201 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 SERPINA2P20848 420 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 BDKRB2P30411 391 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 GLIPR1P48060 266 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 AQP4P55087 323 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 WNT4P56705 351 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 PIGYQ3MUY2 71 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 Q499Y3 187 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 PAN3Q58A45 887 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 YIF1BQ5BJH7 314 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 DMKNQ6E0U4 476 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 ASPHD2Q6ICH7 369 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 LAIR2Q6ISS4 152 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 CRIP3Q6Q6R5 217 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 CHST4Q8NCG5 386 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 PXT1Q8NFP0 134 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 NDNFQ8TB73 568 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 TFAP2CQ92754 450 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 OR14A2Q96R54 314 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 METTL9Q9H1A3 318 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 GAL3ST2Q9H3Q3 398 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 ERGIC3Q9Y282 383 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 UBE2J1Q9Y385 318 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 MMP24Q9Y5R2 645 aa9.4□□□□□ -0.9
SMARCE1-203ENST00000377808 H0YHG0 523 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 CSTBP04080 98 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 CELP19835 753 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 ERP29P30040 261 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 TGFBR2P37173 567 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 GLP1RP43220 463 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 SSX2Q16385 188 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 ZNF529Q6P280 563 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 Q6P435 159 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 Q6ZSV7 163 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 JAGN1Q8N5M9 183 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 RPS4Y2Q8TD47 263 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 PGLYRP3Q96LB9 341 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 ZNF184Q99676 751 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 MEGF9Q9H1U4 602 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 PLCXD1Q9NUJ7 323 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 SCN3BQ9NY72 215 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 TBL2Q9Y4P3 447 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 HILPDAQ9Y5L2 63 aa9.39□□□□□ -0.91
SMARCE1-203ENST00000377808 IGHV2-26A0A0B4J1V2 119 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 TRBV5-5A0A0J9YX44 114 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 ODAMA1E959 279 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 MAGEA13PA6NCF6 341 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 ODF3BA8MYP8 253 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 MMP23AO75900 390 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 MAS1P04201 325 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 ALDOBP05062 364 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 CDK2P24941 298 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 PTGFRP43088 359 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 IL13RA2Q14627 380 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 ZNF626Q68DY1 528 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 OR4D6Q8NGJ1 314 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 NRG4Q8WWG1 115 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 MND1Q9BWT6 205 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 PPIL3Q9H2H8 161 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 VCX3BQ9H321 246 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 RAB18Q9NP72 206 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 TENM1Q9UKZ4 2725 aa9.38□□□□□ -0.91
SMARCE1-203ENST00000377808 TRAV8-7A0A075B6U6 113 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 MEIKINA0A087WXM9 373 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 F2RL2O00254 374 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 OR7C1O76099 320 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 CDK1P06493 297 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 NFYBP25208 207 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 LMO1P25800 156 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 GABRA5P31644 462 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 RAB13P51153 203 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 RPS11P62280 158 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 MED22Q15528 200 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 LTC4SQ16873 150 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 SLC22A6Q4U2R8 563 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 C6orf141Q5SZD1 244 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 ELP2Q6IA86 826 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 OR52W1Q6IF63 320 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 ABHD12Q8N2K0 398 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 OSR2Q8N2R0 312 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 NANOGP1Q8N7R0 232 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 ZNF485Q8NCK3 441 aa9.37□□□□□ -0.91
SMARCE1-203ENST00000377808 OR11H6Q8NGC7 330 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms