RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR2F1Q13607 317 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 KISS1Q15726 138 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 STK11Q15831 433 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SGCAQ16586 387 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 AANATQ16613 207 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 RSPO1Q2MKA7 263 aaPredicted RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SCGB2B2Q4G0G5 96 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 DCAF12Q5T6F0 453 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 RIPPLY2Q5TAB7 128 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 RTL6Q6ICC9 239 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PET117Q6UWS5 81 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 DRAM2Q6UX65 266 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 RFPL4BQ6ZWI9 263 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SLC16A14Q7RTX9 510 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 GLRX5Q86SX6 157 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SLC51BQ86UW2 128 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TMEM200AQ86VY9 491 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 LHFPL1Q86WI0 220 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 COMMD2Q86X83 199 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 KCNRGQ8N5I3 272 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 DEFB123Q8N688 67 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 GVQW1Q8N7I0 195 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TMEM104Q8NE00 496 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 OR4S1Q8NGB4 309 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 OR52H1Q8NGJ2 320 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 OR4K15Q8NH41 348 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 FAM110DQ8TAY7 271 aaPredicted RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 CT55Q8WUE5 264 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 HAS2Q92819 552 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SPSB1Q96BD6 273 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 RAB3CQ96E17 227 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 CPNE2Q96FN4 548 aaPredicted RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 ZNF799Q96GE5 643 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ADGRG7Q96K78 797 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SCGB3A2Q96PL1 93 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 GPER1Q99527 375 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PHB2Q99623 299 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 GAL3ST1Q99999 423 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 NICN1Q9BSH3 213 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 DDA1Q9BW61 102 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 SRXN1Q9BYN0 137 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ULBP2Q9BZM5 246 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ARL6Q9H0F7 186 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 FXYD6Q9H0Q3 95 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TMEM38BQ9NVV0 291 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ZNF224Q9NZL3 707 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 MYEF2Q9P2K5 600 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 SHPKQ9UHJ6 478 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 ZNF391Q9UJN7 358 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 NUP50Q9UKX7 468 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PADI1Q9ULC6 663 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 FARSAQ9Y285 508 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 NOP16Q9Y3C1 178 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 PCDHGA1Q9Y5H4 931 aa4.1□□□□□ -1.75
USP48-202ENST00000374730 TNRC6AQ8NDV7 1962 aaKnown RBP4.1□□□□□ -1.75
USP48-202ENST00000374730 ARHGAP21Q5T5U3 1957 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 RTTNQ86VV8 2226 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 CNTRLQ7Z7A1 2325 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TRBV6-7A0A0A0MS04 114 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 IGHV3-15A0A0B4J1V0 119 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 A0A0G2JMM0 328 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 A0A1B0GW55 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 A0A1W2PPB8 328 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 A0A1W2PRS3 328 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 C5orf63A6NC05 138 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR5H15A6NDH6 313 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR6C6A6NF89 314 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR5H14A6NHG9 310 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR2AT4A6NND4 320 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SERPINE3A8MV23 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 KIR3DP1A8MWS1 328 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 F5H5K5 113 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 G3V3Y1 287 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 I3L521 148 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TNFSF11O14788 317 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SOCS1O15524 211 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 RRP8O43159 456 aaKnown RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 BCL2L11O43521 198 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SYNGR3O43761 229 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 CYTIPO60759 359 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 CRTAPO75718 401 aaPredicted RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 CRYZL1O95825 349 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 WDPCPO95876 746 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 IFNA6P05013 189 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 CSN2P05814 226 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L2P0CJ85 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L3P0CJ86 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L4P0CJ87 422 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L5P0CJ88 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L6P0CJ89 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4L7P0CJ90 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 M6PRP20645 277 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ZP3P21754 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 CPT2P23786 658 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OTX2P32243 289 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 PTGFRP43088 359 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DSCR9P59020 149 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms