RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CRTAPO75718 401 aaPredicted RBP9.4□□□□□ -0.9
HSPG2-202ENST00000374676 GABARAPO95166 117 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 IL1AP01583 271 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 CLEC2LP0C7M8 214 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 ERP29P30040 261 aaKnown RBP9.4□□□□□ -0.9
HSPG2-202ENST00000374676 LSM3P62310 102 aaKnown RBP9.4□□□□□ -0.9
HSPG2-202ENST00000374676 RPS27AP62979 156 aaKnown RBP9.4□□□□□ -0.9
HSPG2-202ENST00000374676 PAX8Q06710 450 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 SCN1BQ07699 218 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 UNC119Q13432 240 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 P2RY14Q15391 338 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 C2orf76Q3KRA6 126 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 HES5Q5TA89 166 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 DCAF12L2Q5VW00 463 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 GPR107Q5VW38 600 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 OR51D1Q8NGF3 324 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 Q96M66 194 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 SELENOIQ9C0D9 397 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 BANF2Q9H503 90 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 SPACA1Q9HBV2 294 aa9.4□□□□□ -0.9
HSPG2-202ENST00000374676 OR7C1O76099 320 aaPredicted RBP9.39□□□□□ -0.91
HSPG2-202ENST00000374676 MPIG6BO95866 241 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 CSN2P05814 226 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 GLAP06280 429 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 PPIAL4GP0DN37 164 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 GABRR1P24046 479 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 TGFBR1P36897 503 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 RPS19P39019 145 aaKnown RBP9.39□□□□□ -0.91
HSPG2-202ENST00000374676 OR3A1P47881 315 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 KCNJ3P48549 501 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 CLDN12P56749 244 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 PAX5Q02548 391 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 MXD1Q05195 221 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 PDCD1Q15116 288 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 GRK1Q15835 563 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 TAF9Q16594 264 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 CTF1Q16619 201 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 SFXN4Q6P4A7 337 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 BTNL3Q6UXE8 466 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 GDPD3Q7L5L3 318 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 CROCCP3Q8IVE0 287 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 FAM89BQ8N5H3 189 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 OR4S1Q8NGB4 309 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 FAM46BQ96A09 425 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 PTX4Q96A99 478 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 BCL7BQ9BQE9 202 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 TM2D1Q9BX74 207 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 NAA50Q9GZZ1 169 aaKnown RBP9.39□□□□□ -0.91
HSPG2-202ENST00000374676 NCOR1P1Q9H4R4 102 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 RCC2Q9P258 522 aaKnown RBP9.39□□□□□ -0.91
HSPG2-202ENST00000374676 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
HSPG2-202ENST00000374676 TMEM272A0A1B0GTI8 110 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 FUOMA2VDF0 154 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 SLC2A2P11168 524 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 FUT3P21217 361 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 TMBIM6P55061 237 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 VBP1P61758 197 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 NCS1P62166 190 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 RPL31P62899 125 aaKnown RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 MEF2CQ06413 473 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 PAN3Q58A45 887 aaKnown RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 FAHD2BQ6P2I3 314 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 C1orf122Q6ZSJ8 110 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 CLVS1Q8IUQ0 354 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 SUMF2Q8NBJ7 301 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 H1FXQ92522 213 aaKnown RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 FAHD2AQ96GK7 314 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 DPCDQ9BVM2 203 aaPredicted RBP9.38□□□□□ -0.91
HSPG2-202ENST00000374676 TMPRSS13Q9BYE2 586 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 CHST6Q9GZX3 395 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 KCNK15Q9H427 330 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 LIN7BQ9HAP6 207 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 LPAR3Q9UBY5 353 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 JMJD1CQ15652 2540 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 SVEP1Q4LDE5 3571 aa9.38□□□□□ -0.91
HSPG2-202ENST00000374676 SMIM30A4D0T7 59 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 RAB6AP20340 208 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 SERPINB10P48595 397 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 P2RX3P56373 397 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 SCAND1P57086 179 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
HSPG2-202ENST00000374676 CR1LQ2VPA4 569 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 TMEM200BQ69YZ2 307 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 Q71RC1 249 aaPredicted RBP9.37□□□□□ -0.91
HSPG2-202ENST00000374676 TEX29Q8N6K0 151 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 KIR3DL3Q8N743 410 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 RAB2BQ8WUD1 216 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 MRI1Q9BV20 369 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 BARHL1Q9BZE3 327 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 PPA2Q9H2U2 334 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 C7orf69Q9H7B7 122 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 C19orf12Q9NSK7 152 aa9.37□□□□□ -0.91
HSPG2-202ENST00000374676 ZNF581Q9P0T4 197 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms