RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 A0A1W2PR80 420 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 NRN1LQ496H8 165 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 TMEM211Q6ICI0 200 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 SLC35G3Q8N808 338 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 IGHV3-64DA0A0J9YX35 117 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 LINC01387J3KSC0 135 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 MUC1P15941 1255 aaPredicted RBP20.41■□□□□ 0.86
CDK9-201ENST00000373264 GNRHRP30968 328 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 HERV-K104P61576 105 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 HAGHLQ6PII5 290 aaPredicted RBP20.41■□□□□ 0.86
CDK9-201ENST00000373264 UQCC3Q6UW78 93 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 ABI3Q9P2A4 366 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 IGKV1D-13A0A0B4J2D9 117 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 MED19A0JLT2 244 aaPredicted RBP20.41■□□□□ 0.86
CDK9-201ENST00000373264 F8W036 122 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 IGKV1-13P0DP09 117 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 BLOC1S1P78537 153 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 SMCO1Q147U7 214 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 CEACAM21Q3KPI0 293 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 C20orf204Q6ZNR8 217 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 MYPOPQ86VE0 399 aaPredicted RBP20.41■□□□□ 0.86
CDK9-201ENST00000373264 LDLRAD3Q86YD5 345 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 SECTM1Q8WVN6 248 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 APOBEC3DQ96AK3 386 aaPredicted RBP20.41■□□□□ 0.86
CDK9-201ENST00000373264 MMP26Q9NRE1 261 aa20.41■□□□□ 0.86
CDK9-201ENST00000373264 EP300Q09472 2414 aaPredicted RBP20.4■□□□□ 0.86
CDK9-201ENST00000373264 WISP2O76076 250 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 IL18BPO95998 194 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 GLP1RP43220 463 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 SUMF1Q8NBK3 374 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 NEK7Q8TDX7 302 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 SMIM8Q96KF7 97 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 RSRP1Q9BUV0 290 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 CACNA1HO95180 2353 aa20.4■□□□□ 0.86
CDK9-201ENST00000373264 CD300LBA8K4G0 201 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 C9JQL5 133 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 SLC33A1O00400 549 aaPredicted RBP20.39■□□□□ 0.86
CDK9-201ENST00000373264 PMP22Q01453 160 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 CBLN2Q8IUK8 224 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 IL22RA1Q8N6P7 574 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 MDS2Q8NDY4 140 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 USB1Q9BQ65 265 aaKnown RBP20.39■□□□□ 0.86
CDK9-201ENST00000373264 RHOFQ9HBH0 211 aa20.39■□□□□ 0.86
CDK9-201ENST00000373264 IGKV1-6A0A0C4DH72 117 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 ATP6V1G2-DDX39BF2Z307 99 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 H7C1Q1 480 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 IL32P24001 234 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 NHLH2Q02577 135 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 PJVKQ0ZLH3 352 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 TECTBQ96PL2 329 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 SPRR3Q9UBC9 169 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 RFNGQ9Y644 331 aa20.39■□□□□ 0.85
CDK9-201ENST00000373264 ARGFXA6NJG6 315 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 HS3ST1O14792 307 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 NME2P1O60361 137 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 SS18L1O75177 396 aaPredicted RBP20.38■□□□□ 0.85
CDK9-201ENST00000373264 CST4P01036 141 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 PRKACAP17612 351 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 FHITP49789 147 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 FGF12P61328 243 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 SRSF6Q13247 344 aaKnown RBP20.38■□□□□ 0.85
CDK9-201ENST00000373264 SPIN3Q5JUX0 258 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 MCEMP1Q8IX19 187 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 TNRC6AQ8NDV7 1962 aaKnown RBP20.38■□□□□ 0.85
CDK9-201ENST00000373264 RHBDL1O75783 438 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 OR2T2Q6IF00 324 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 ZNF818PQ6ZRF7 136 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 Q8NFD4 153 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 SUCNR1Q9BXA5 334 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 Q9N2K0 584 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 UQCC1Q9NVA1 299 aa20.38■□□□□ 0.85
CDK9-201ENST00000373264 NKX2-6A6NCS4 301 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 NXPH3O95157 252 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 FBXW12Q6X9E4 464 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 RDH5Q92781 318 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 TRAV39A0A0B4J263 110 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 C3orf85A0A1B0GTC6 90 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 ZNF724A8MTY0 619 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 TOR1AO14656 332 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 MPPED1O15442 326 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 TNFSF12O43508 249 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 C1QL1O75973 258 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 NAPSAO96009 420 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 CELA3BP08861 270 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 OR8U9P0C7N5 309 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 NPBWR1P48145 328 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 OR8U1Q8NH10 309 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 SH3BGRL3Q9H299 93 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 ATPIF1Q9UII2 106 aa20.37■□□□□ 0.85
CDK9-201ENST00000373264 TAAR5O14804 337 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 CA6P23280 308 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 Q6ZRG5 221 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 TBC1D26Q86UD7 250 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 LGI3Q8N145 548 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 GAPTQ8N292 157 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 LRTM2Q8N967 370 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 DMBX1Q8NFW5 382 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 PCDHB16Q9NRJ7 776 aa20.36■□□□□ 0.85
CDK9-201ENST00000373264 RCL1Q9Y2P8 373 aaKnown RBP20.36■□□□□ 0.85
CDK9-201ENST00000373264 TRAPPC2LH3BP13 241 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms