RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ST6GALNAC5Q9BVH7 336 aa8.68□□□□□ -1.02
PRPF38B-203ENST00000370025 BANF2Q9H503 90 aa8.68□□□□□ -1.02
PRPF38B-203ENST00000370025 GPR84Q9NQS5 396 aa8.68□□□□□ -1.02
PRPF38B-203ENST00000370025 SLC17A5Q9NRA2 495 aa8.68□□□□□ -1.02
PRPF38B-203ENST00000370025 RFNGQ9Y644 331 aa8.68□□□□□ -1.02
PRPF38B-203ENST00000370025 A0A0A6YYH2 397 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 A6NJ64 397 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 CLEC12BQ2HXU8 276 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 CEACAM16Q2WEN9 425 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 FAM166AQ6J272 317 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 SNX22Q96L94 193 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 FOXB1Q99853 325 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 RARRES2Q99969 163 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 EGLN1Q9GZT9 426 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 GPR35Q9HC97 309 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 TIMM10BQ9Y5J6 103 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 SDCBPO00560 298 aaPredicted RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 CD37P11049 281 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 RPS23P62266 143 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 BATFQ16520 125 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 MCEMP1Q8IX19 187 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 ADAT3Q96EY9 351 aaPredicted RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 DEFB127Q9H1M4 99 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 FAM212BQ9NTI7 297 aaPredicted RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 GEMIN2O14893 280 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 TM4SF5O14894 197 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 CD5P06127 495 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 CXCL1P09341 107 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 SFTPCP11686 197 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 TAGLN2P37802 199 aaKnown RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 TNFSF10P50591 281 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 PCBD1P61457 104 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 RAB35Q15286 201 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 RSPO4Q2I0M5 234 aaPredicted RBP8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 LPCAT3Q6P1A2 487 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 SLCO5A1Q9H2Y9 848 aa8.67□□□□□ -1.02
PRPF38B-203ENST00000370025 TRGV5A0A0B4J1U4 118 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 A6NNC1 897 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF891A8MT65 544 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF587BE7ETH6 402 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 M0R135 149 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNHIT1O43257 154 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 B4GALT1P15291 398 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 OR3A2P47893 321 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 C1orf100Q5SVJ3 147 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 PNLDC1Q8NA58 520 aaKnown RBP8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 FDCSPQ8NFU4 85 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HPSE2Q8WWQ2 592 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF799Q96GE5 643 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF319Q9P2F9 582 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF407Q9C0G0 2248 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 LOC390937A0A1W2PQ73 354 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 CCL1P22362 96 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 RNPS1Q15287 305 aaKnown RBP8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 AWAT2Q6E213 333 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SLC16A14Q7RTX9 510 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SLC25A42Q86VD7 318 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SLC22A24Q8N4F4 322 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 FNDC9Q8TBE3 224 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 WFIKKN1Q96NZ8 548 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 LINC00470Q9BZP3 86 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 CALHM2Q9HA72 323 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SLC2A8Q9NY64 477 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 F8VVB4 439 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 F8VWA3 439 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 EFSO43281 561 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 PKIAP61925 76 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 TLE1Q04724 770 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HAGHQ16775 308 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 ADGRE4PQ86SQ3 457 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 TUSC5Q8IXB3 177 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 OR1J1Q8NGS3 322 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 MRGPRFQ96AM1 343 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 TUBA4BQ9H853 241 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 SIRT7Q9NRC8 400 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 FBXL17Q9UF56 701 aa8.66□□□□□ -1.02
PRPF38B-203ENST00000370025 A0A0U1RQV5 110 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 ZNF724A8MTY0 619 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 RPP30P78346 268 aaKnown RBP8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 HNF4GQ14541 408 aa8.65□□□□□ -1.02
PRPF38B-203ENST00000370025 RTP5Q14D33 572 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms