RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CCL2P13500 99 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SYT13Q7L8C5 426 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 GAPTQ8N292 157 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 TMEM252Q8N6L7 170 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 IL22RA1Q8N6P7 574 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SCGB1C1Q8TD33 95 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SPSB1Q96BD6 273 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 PLEKHF2Q9H8W4 249 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SEBOXQ9HB31 216 aaPredicted RBP7.09□□□□□ -1.27
CD46-208ENST00000367042 ADAMTS9Q9P2N4 1935 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SHISA7A6NL88 538 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 KLK3P07288 261 aaPredicted RBP7.09□□□□□ -1.27
CD46-208ENST00000367042 IAPPP10997 89 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 NPBWR2P48146 333 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 ELLP55199 621 aaPredicted RBP7.09□□□□□ -1.27
CD46-208ENST00000367042 NXPH1P58417 271 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 TLE4Q04727 773 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 HEPN1Q6WQI6 88 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 ZNF600Q6ZNG1 722 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 ZNF611Q8N823 705 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 NFAM1Q8NET5 270 aaPredicted RBP7.09□□□□□ -1.27
CD46-208ENST00000367042 MSI2Q96DH6 328 aaKnown RBP7.09□□□□□ -1.27
CD46-208ENST00000367042 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 SNX22Q96L94 193 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 TUBA4BQ9H853 241 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 FRYLO94915 3013 aa7.09□□□□□ -1.27
CD46-208ENST00000367042 A0A1W2PR80 420 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 ZNF705GA8MUZ8 300 aaPredicted RBP7.09□□□□□ -1.28
CD46-208ENST00000367042 PDCD6O75340 191 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 SCAF4O95104 1147 aaKnown RBP7.09□□□□□ -1.28
CD46-208ENST00000367042 IGHV2-70P01814 119 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 SERPINE2P07093 398 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 CCL3P10147 92 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 ALDH3B1P43353 468 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 CDX1P47902 265 aaPredicted RBP7.09□□□□□ -1.28
CD46-208ENST00000367042 ERVFRD-1P60508 538 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 ZNF880Q6PDB4 577 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 TMEM171Q8WVE6 324 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 EXTL1Q92935 676 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 NTNG2Q96CW9 530 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 SGCZQ96LD1 299 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 FSCN3Q9NQT6 498 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 GPR27Q9NS67 375 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 PISDQ9UG56 409 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 PTRH2Q9Y3E5 179 aaKnown RBP7.09□□□□□ -1.28
CD46-208ENST00000367042 V9GYS6 101 aa7.09□□□□□ -1.28
CD46-208ENST00000367042 CPAMD8Q8IZJ3 1885 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 KIAA2026Q5HYC2 2103 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 LRP4O75096 1905 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 A0A087WZY1 265 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 IGKV1-12A0A0C4DH73 117 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 IGHV3-64DA0A0J9YX35 117 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 CEBPZOSA8MTT3 80 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 K7N7A8 449 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 HS3ST1O14792 307 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 BCAT2O15382 392 aaPredicted RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 RRP8O43159 456 aaKnown RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 IGKV1D-12P01611 117 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 PAX6P26367 422 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 HAAOP46952 286 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 SRYQ05066 204 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 GUSBP11Q6P575 273 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 LHFPL2Q6ZUX7 228 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 AAED1Q7RTV5 226 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 LILRB2Q8N423 598 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 OR1F12Q8NHA8 337 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 SNIP1Q8TAD8 396 aaKnown RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 GALNT14Q96FL9 552 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 PLK3Q9H4B4 646 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 CCL28Q9NRJ3 127 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 GAB2Q9UQC2 676 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 A0A096LPE4 126 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 A0A1W2PPZ6 126 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 SLC34A2O95436 690 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 SCTP09683 121 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 MMP9P14780 707 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 FUT3P21217 361 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 DTYMKP23919 212 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 CD200P41217 278 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 PTGDSP41222 190 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 ZNF92Q03936 586 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 ADIRFQ15847 76 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 RSPO1Q2MKA7 263 aaPredicted RBP7.08□□□□□ -1.28
CD46-208ENST00000367042 CEACAM16Q2WEN9 425 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 CALHM1Q8IU99 346 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 RDH5Q92781 318 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 MUCL1Q96DR8 90 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 C18orf12Q96KH6 178 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 FAM210BQ96KR6 192 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 RSG1Q9BU20 258 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 KCNS2Q9ULS6 477 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 HSF4Q9ULV5 492 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 EML6Q6ZMW3 1958 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 FREM2Q5SZK8 3169 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 KNTC1P50748 2209 aa7.08□□□□□ -1.28
CD46-208ENST00000367042 TRDCB7Z8K6 153 aa7.07□□□□□ -1.28
CD46-208ENST00000367042 C3orf80F5H4A9 247 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms