RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 DHRS7CA6NNS2 312 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 CEACAM1P13688 526 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 GRB2P62993 217 aaKnown RBP16.55■□□□□ 0.24
CMTM3-201ENST00000361909 RELQ04864 619 aaPredicted RBP16.55■□□□□ 0.24
CMTM3-201ENST00000361909 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 MISP3Q96FF7 219 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 FAM71F1Q96KD3 344 aaPredicted RBP16.55■□□□□ 0.24
CMTM3-201ENST00000361909 RBM14Q96PK6 669 aaKnown RBP16.55■□□□□ 0.24
CMTM3-201ENST00000361909 WWTR1Q9GZV5 400 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF700Q9H0M5 742 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 PRO1933Q9H354 126 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 C11orf1Q9H5F2 150 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 C19orf25Q9UFG5 118 aaPredicted RBP16.55■□□□□ 0.24
CMTM3-201ENST00000361909 URGCP-MRPS24S4R325 110 aa16.55■□□□□ 0.24
CMTM3-201ENST00000361909 CCDC187A0A096LP49 1063 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 TRAV1-1A0A0B4J248 108 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 IGKV1-9A0A0C4DH69 117 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 GDF9O60383 454 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 CYB5R3P00387 301 aaPredicted RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 OPN1MWP04001 364 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 OPN1MW2P0DN77 364 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 OPN1MW3P0DN78 364 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 KLK2P20151 261 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 UCP3P55916 312 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 NUTF2P61970 127 aaKnown RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 TAF9Q16594 264 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 HAGHQ16775 308 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 NFAM1Q8NET5 270 aaPredicted RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 PP6455Q8WZ26 134 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 SUMO3P55854 103 aaPredicted RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 CCL20P78556 96 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 DCAF12Q5T6F0 453 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 LYZL2Q7Z4W2 148 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 ZNF441Q8N8Z8 693 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 CLDND2Q8NHS1 167 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 C10orf35Q96D05 121 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 MSI2Q96DH6 328 aaKnown RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 SPIN2AQ99865 258 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 SPIN2BQ9BPZ2 258 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 MRPL37Q9BZE1 423 aaKnown RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 CTDSP1Q9GZU7 261 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 PLEKHF2Q9H8W4 249 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 ALKBH4Q9NXW9 302 aa16.54■□□□□ 0.24
CMTM3-201ENST00000361909 MCTS1Q9ULC4 181 aaKnown RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 PTRH2Q9Y3E5 179 aaKnown RBP16.54■□□□□ 0.24
CMTM3-201ENST00000361909 A0A1B0GV50 99 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 PHOX2AO14813 284 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 WISP1O95388 367 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 MMP9P14780 707 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 RAB4AP20338 218 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 GABREP78334 506 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 BAXQ07812 192 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 PDZD11Q5EBL8 140 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 UNQ6494/PRO21346Q6UXR6 183 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 CPEB2Q7Z5Q1 589 aaKnown RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 DDIT4LQ96D03 193 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 LIN37Q96GY3 246 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 CDH20Q9HBT6 801 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 PLEKHJ1Q9NW61 149 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 IGKV1D-8A0A087WSZ0 117 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 A0A087WZY1 265 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 GCGP01275 180 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 IGLV3-1P01715 115 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 TMEM225BP0DP42 221 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 IL11P20809 199 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 KCNMB1Q16558 191 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 COA6Q5JTJ3 125 aaKnown RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 NOXO1Q8NFA2 376 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 JSRP1Q96MG2 331 aaPredicted RBP16.53■□□□□ 0.24
CMTM3-201ENST00000361909 MED29Q9NX70 200 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 LOXL2Q9Y4K0 774 aa16.53■□□□□ 0.24
CMTM3-201ENST00000361909 ANKUB1A6NFN9 424 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 BIDP55957 195 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 ZFP62Q8NB50 900 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-201ENST00000361909 ADPRHL1Q8NDY3 354 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 OR52M1Q8NGK5 317 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 GPR87Q9BY21 358 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 AKIRIN1Q9H9L7 192 aaPredicted RBP16.52■□□□□ 0.24
CMTM3-201ENST00000361909 SLC2A9Q9NRM0 540 aa16.52■□□□□ 0.24
CMTM3-201ENST00000361909 A0A1B0GU03 582 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 LOC102723971A0A1B0GUV8 181 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 DFFBO76075 338 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 RNF4P78317 190 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 TGIF2LXQ8IUE1 241 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 HAS2Q92819 552 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 Q96M66 194 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 LYRM2Q9NU23 88 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-201ENST00000361909 SPEGQ15772 3267 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 STMND1H3BQB6 276 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 GABRR1P24046 479 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 CTSSP25774 331 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 FOXL2P58012 376 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 RPL23AP62750 156 aaKnown RBP16.51■□□□□ 0.23
CMTM3-201ENST00000361909 OR8G1Q15617 311 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 USF2Q15853 346 aaPredicted RBP16.51■□□□□ 0.23
CMTM3-201ENST00000361909 CRIP3Q6Q6R5 217 aa16.51■□□□□ 0.23
CMTM3-201ENST00000361909 FAM185AQ8N0U4 392 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms