RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MARS2Q96GW9 593 aaKnown RBP19.4■□□□□ 0.7
LDB1-201ENST00000361198 ZNF175Q9Y473 711 aa19.4■□□□□ 0.7
LDB1-201ENST00000361198 LRP3O75074 770 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 DEDDO75618 318 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 SULT1A2P50226 295 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 TMEM88Q6PEY1 159 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 Q8NFD4 153 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 WNT2BQ93097 391 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 SLAMF9Q96A28 289 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 OR51B6Q9H340 312 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 RHOFQ9HBH0 211 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 GP6Q9HCN6 339 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 TREM1Q9NP99 234 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 PRELID3BQ9Y3B1 194 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 ZNF292O60281 2723 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 SNAPINO95295 136 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 BCL3P20749 454 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 RPL12P30050 165 aaKnown RBP19.39■□□□□ 0.69
LDB1-201ENST00000361198 Q6ZPA2 131 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 MDP1Q86V88 176 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 SPAG16Q8N0X2 631 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 ADAT1Q9BUB4 502 aaKnown RBP19.39■□□□□ 0.69
LDB1-201ENST00000361198 HRH4Q9H3N8 390 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 NECAP2Q9NVZ3 263 aa19.39■□□□□ 0.69
LDB1-201ENST00000361198 RIF1Q5UIP0 2472 aaKnown RBP19.38■□□□□ 0.69
LDB1-201ENST00000361198 PTPRBP23467 1997 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 CD300LBA8K4G0 201 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 ZNF732B4DXR9 585 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 H7C2Y5 167 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 FUT3P21217 361 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 GGNBP1Q5YKI7 109 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 OR2A2Q6IF42 318 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 HAGHLQ6PII5 290 aaPredicted RBP19.38■□□□□ 0.69
LDB1-201ENST00000361198 P4HA3Q7Z4N8 544 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 GMPPAQ96IJ6 420 aaPredicted RBP19.38■□□□□ 0.69
LDB1-201ENST00000361198 HS3ST6Q96QI5 342 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 NRIP2Q9BQI9 281 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 ARID1AO14497 2285 aa19.38■□□□□ 0.69
LDB1-201ENST00000361198 K7EPK0 472 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 IFNA21P01568 189 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 LPAR6P43657 344 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 FAM71E2Q8N5Q1 922 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 TMEM231Q9H6L2 316 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 ZNF442Q9H7R0 627 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 RCC2Q9P258 522 aaKnown RBP19.37■□□□□ 0.69
LDB1-201ENST00000361198 LILRA1O75019 489 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 JTBO76095 146 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 IGHG3P01860 377 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 SLC22A25Q6T423 547 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 IGFL2Q6UWQ7 119 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 FOXRED2Q8IWF2 684 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 GCNT2Q8N0V5 402 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 GALNT14Q96FL9 552 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 PRRX2Q99811 253 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 LAMA5O15230 3695 aa19.37■□□□□ 0.69
LDB1-201ENST00000361198 MUC1P15941 1255 aaPredicted RBP19.36■□□□□ 0.69
LDB1-201ENST00000361198 RCC1P18754 421 aaPredicted RBP19.36■□□□□ 0.69
LDB1-201ENST00000361198 BTNL8Q6UX41 500 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 MRPL24Q96A35 216 aaKnown RBP19.36■□□□□ 0.69
LDB1-201ENST00000361198 MTCH1Q9NZJ7 389 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 AMDHD2Q9Y303 409 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 PIGPP57054 158 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 DPPA2Q7Z7J5 298 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 NANOS1Q8WY41 292 aaKnown RBP19.36■□□□□ 0.69
LDB1-201ENST00000361198 OPA3Q9H6K4 179 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 CLCF1Q9UBD9 225 aa19.36■□□□□ 0.69
LDB1-201ENST00000361198 KLF2Q9Y5W3 355 aaPredicted RBP19.36■□□□□ 0.69
LDB1-201ENST00000361198 MED6O75586 246 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 SPINK2P20155 84 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 FCGR2CP31995 323 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 SMCO1Q147U7 214 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 CBLN2Q8IUK8 224 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 TOMM40LQ969M1 308 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 ZNF286AQ9HBT8 521 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 PARP11Q9NR21 331 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 PLA2G2EQ9NZK7 142 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 IL36RNQ9UBH0 155 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 FBXL17Q9UF56 701 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 KCNIP3Q9Y2W7 256 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 ESPL1Q14674 2120 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 CD5P06127 495 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 TMEM33P57088 247 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 SAXO1Q8IYX7 474 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 OR5A2Q8NGI9 324 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 LYPD6BQ8NI32 183 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 PLEKHA2Q9HB19 425 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 FAM96BQ9Y3D0 163 aa19.35■□□□□ 0.69
LDB1-201ENST00000361198 NPBWR1P48145 328 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 FGF12P61328 243 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 TMEM187Q14656 261 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 TMEM211Q6ICI0 200 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 MYPOPQ86VE0 399 aaPredicted RBP19.34■□□□□ 0.69
LDB1-201ENST00000361198 LRTM2Q8N967 370 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 POM121Q96HA1 1249 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 HIST1H2AAQ96QV6 131 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 TRIB1Q96RU8 372 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 A0A1W2PR80 420 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 RNASEK-C17orf49H0YIS7 233 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 SYNGR1O43759 233 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 F12P00748 615 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms