RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 LAMB2P55268 1798 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 FCMRO60667 390 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 CDC14BO60729 498 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 NKX2-2O95096 273 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ACAA1P09110 424 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 PGA4P0DJD7 388 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 PGA5P0DJD9 388 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SLC16A12Q6ZSM3 486 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ZNF429Q86V71 674 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 TINAGL1Q9GZM7 467 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 ISG20L2Q9H9L3 353 aaKnown RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 KLK11Q9UBX7 282 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 NGFP01138 241 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR3A1P47881 315 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 CLDN34H7C241 214 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 FGF9P31371 208 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 ASCL1P50553 236 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 MZB1Q8WU39 189 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 C20orf141Q9NUB4 165 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SIGLEC7Q9Y286 467 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 SCGB1D4Q6XE38 83 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR52B4Q8NGK2 314 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 HLA-GP17693 338 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 CD96P40200 585 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 WDR38Q5JTN6 314 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR10D3Q8NH80 312 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR1L3Q8NH93 324 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 TRAPPC4Q9Y296 219 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 KIAA1324LA8MWY0 1029 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 UQCRFS1P47985 274 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 TP53I13Q8NBR0 393 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 A0A1B0GTQ1 180 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 FZD5Q13467 585 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ZNF764Q96H86 408 aaPredicted RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 KCNE3Q9Y6H6 103 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 VDAC1P21796 283 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 NPY1RP25929 384 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 OR2C3Q8N628 320 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 MRPS16Q9Y3D3 137 aaKnown RBP8.6□□□□□ -1.03
CUX1-203ENST00000360264 B4DEV8 164 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 IFNL4K9M1U5 179 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 CORTO00230 105 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 PDE6DO43924 150 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 PNLIPP16233 465 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 C19orf57Q0VDD7 668 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 TMEM215Q68D42 235 aa8.6□□□□□ -1.03
CUX1-203ENST00000360264 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 AMMECR1LQ6DCA0 310 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 VSIG4Q9Y279 399 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 SBF1O95248 1867 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 A0A1W2PQD3 144 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 MFSD2BA6NFX1 497 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 OR5AL1P0C617 328 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 CA6P23280 308 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 WIPI1Q5MNZ9 446 aaPredicted RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 TOMM20LQ6UXN7 152 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZNF680Q8NEM1 530 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 EML6Q6ZMW3 1958 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 KLF7O75840 302 aaPredicted RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 PMCHP20382 165 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 RELBQ01201 579 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 HES3Q5TGS1 186 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 KIRREL2Q6UWL6 708 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZBTB34Q8NCN2 500 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 SLC25A22Q9H936 323 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 A0A1B0GU03 582 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 CST7O76096 145 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 CTSDP07339 412 aaPredicted RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 PATE1Q8WXA2 126 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 DERL3Q96Q80 235 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 CHRNA10Q9GZZ6 450 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 P01737 135 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 GABRG2P18507 467 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 GUK1Q16774 197 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZNF32P17041 273 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 C12orf73Q69YU5 71 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZNF793Q6ZN11 406 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 OR10A7Q8NGE5 316 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ZDHHC8Q9ULC8 765 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 B3GALT4O96024 378 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 ELOBQ15370 118 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 RNF165Q6ZSG1 346 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 MRGPREQ86SM8 312 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 PCNPQ8WW12 178 aaKnown RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 MRPS11P82912 194 aaKnown RBP8.59□□□□□ -1.03
CUX1-203ENST00000360264 LINC00303Q3SY05 128 aa8.59□□□□□ -1.03
CUX1-203ENST00000360264 DLEC1Q9Y238 1755 aa8.59□□□□□ -1.04
CUX1-203ENST00000360264 EPHA8P29322 1005 aaPredicted RBP8.58□□□□□ -1.04
CUX1-203ENST00000360264 GUSBP11Q6P575 273 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 Q8WTZ3 238 aa8.58□□□□□ -1.04
CUX1-203ENST00000360264 SIRT7Q9NRC8 400 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms