RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 LCATP04180 440 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 CT62P0C5K7 136 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 ZNF888P0CJ79 500 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-201ENST00000359785 PGA4P0DJD7 388 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 GIMD1P0DJR0 217 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 NME1P15531 152 aaKnown RBP3.89□□□□□ -1.79
PTPN22-201ENST00000359785 COL9A1P20849 921 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 ATP6V0CP27449 155 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 THBS3P49746 956 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 CEBPGP53567 150 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 ATP5IP56385 69 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-201ENST00000359785 SLC37A1P57057 533 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 COL10A1Q03692 680 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 MESP2Q0VG99 397 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 SQSTM1Q13501 440 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 KIR3DS1Q14943 382 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 SPIN3Q5JUX0 258 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-201ENST00000359785 IER5LQ5T953 404 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 OR2T2Q6IF00 324 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 COLCA1Q6ZS62 124 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 C19orf35Q6ZS72 473 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 FAM231DQ6ZW35 169 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 FAM57BQ71RH2 274 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 MTSS1LQ765P7 747 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 SPATA12Q7Z6I5 190 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 RABEPKQ7Z6M1 372 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 ZFP82Q8N141 532 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 BHLHE23Q8NDY6 225 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 MEGF10Q96KG7 1140 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 OPN3Q9H1Y3 402 aaPredicted RBP3.89□□□□□ -1.79
PTPN22-201ENST00000359785 OR10A2Q9H208 303 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 GPR173Q9NS66 373 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 NKIRAS2Q9NYR9 191 aa3.89□□□□□ -1.79
PTPN22-201ENST00000359785 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 IGKV1-9A0A0C4DH69 117 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 TMEM235A6NFC5 223 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 A6NIN4 97 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LINC01619G3V211 115 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MS4A18H0YCH9 400 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 TRGC2P03986 189 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SLC35G4P0C7Q5 338 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 FUT3P21217 361 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PSMB10P40306 273 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 NAA10P41227 235 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 UBE2V1Q13404 147 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MEP1BQ16820 701 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MS4A18Q3C1V0 323 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 NCMAPQ5T1S8 102 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 DCAF12Q5T6F0 453 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SDHAF4Q5VUM1 108 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ZAR1Q86SH2 424 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MYPOPQ86VE0 399 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 THNSL2Q86YJ6 484 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LINC00346Q8IVM7 164 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SELENOHQ8IZQ5 122 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ZNF614Q8N883 585 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 FADS6Q8N9I5 356 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SKA2Q8WVK7 121 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 RNF2Q99496 336 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ATG101Q9BSB4 218 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PBOV1Q9GZY1 135 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LANCL2Q9NS86 450 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MRPL15Q9P015 296 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 GRHPRQ9UBQ7 328 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PCNX3Q9H6A9 2034 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 TGIF2-C20orf24A0A0A6YYL0 155 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LILRA5A6NI73 299 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PRSS46E5RG02 174 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 TGFBR3LH3BV60 316 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 M0QXV9 152 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SLC33A1O00400 549 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MPDU1O75352 247 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 BMP5P22003 454 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 NPY1RP25929 384 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PPP1CCP36873 323 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 P2RY2P41231 377 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 CNN1P51911 297 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 LCN6P62502 163 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 RPL23P62829 140 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 OR7A5Q15622 319 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 C2orf27AQ580R0 203 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ARSJQ5FYB0 599 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 AKR1C8PQ5T2L2 129 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 SLC35E4Q6ICL7 350 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 UFSP1Q6NVU6 142 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 MRPL54Q6P161 138 aaKnown RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ZNF525Q8N782 197 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 NAXEQ8NCW5 288 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 OR4F17Q8NGA8 305 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 OR52R1Q8NGF1 315 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 OR52E5Q8NH55 327 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 GPR119Q8TDV5 335 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 C22orf15Q8WYQ4 148 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 OR4F4Q96R69 305 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 ZFYVE21Q9BQ24 234 aa3.88□□□□□ -1.79
PTPN22-201ENST00000359785 C6orf106Q9H6K1 298 aaPredicted RBP3.88□□□□□ -1.79
PTPN22-201ENST00000359785 PUS1Q9Y606 427 aaKnown RBP eCLIP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms