RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 TCRBV16S1A1N1A0A5B0 115 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 FAM106CPP0CH98 169 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 ATP6V1FQ16864 119 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 SLC23A3Q6PIS1 610 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 OR4A4PQ8NGN8 299 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 HARBI1Q96MB7 349 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 PYCARD-AS1I3L0S3 204 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 HIST1H1EP10412 219 aaKnown RBP11.42□□□□□ -0.58
NLRC3-202ENST00000359128 C21orf58P58505 322 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 RPEL1Q2QD12 228 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
NLRC3-202ENST00000359128 FADS6Q8N9I5 356 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 ZNF596Q8TC21 504 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 SLC6A13Q9NSD5 602 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 LAMB2P55268 1798 aa11.42□□□□□ -0.58
NLRC3-202ENST00000359128 OR5AC1P0C628 307 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 DAOP14920 347 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 CTSSP25774 331 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 ATP5J2P56134 94 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 TBC1D26Q86UD7 250 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 GHITMQ9H3K2 345 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 PARP11Q9NR21 331 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 GPR27Q9NS67 375 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 HTR1DP28221 377 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 CDC34P49427 236 aaPredicted RBP11.41□□□□□ -0.58
NLRC3-202ENST00000359128 KRTDAPP60985 99 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 IZUMO4Q1ZYL8 232 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 C9orf40Q8IXQ3 194 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 VSIG4Q9Y279 399 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 TRAPPC1Q9Y5R8 145 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 PLPP2O43688 288 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
NLRC3-202ENST00000359128 PDLIM4P50479 330 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 MESTQ5EB52 335 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
NLRC3-202ENST00000359128 LIMS2Q7Z4I7 341 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 TRAPPC2P0DI81 140 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 TRAPPC2BP0DI82 140 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 TTC3P53804 2025 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 C11orf87Q6NUJ2 197 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 NFAM1Q8NET5 270 aaPredicted RBP11.41□□□□□ -0.58
NLRC3-202ENST00000359128 ZNF721Q8TF20 911 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 ZNF714Q96N38 554 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 PRNDQ9UKY0 176 aa11.41□□□□□ -0.58
NLRC3-202ENST00000359128 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 GABRA6Q16445 453 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 LIAT1Q6ZQX7 453 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 RNF165Q6ZSG1 346 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 ZNF638Q14966 1978 aaKnown RBP11.4□□□□□ -0.58
NLRC3-202ENST00000359128 J3QT63 122 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 HRKO00198 91 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 UBE2L3P68036 154 aaKnown RBP11.4□□□□□ -0.58
NLRC3-202ENST00000359128 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 EID2BQ96D98 161 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 PRDM14Q9GZV8 571 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 CTAG2O75638 210 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 OR5C1Q8NGR4 320 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 PRSS3P2Q8NHM4 247 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 NRTNQ99748 197 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 A0A1B0GVG6 124 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 ZG16BQ96DA0 208 aa11.4□□□□□ -0.58
NLRC3-202ENST00000359128 WDR89Q96FK6 387 aaPredicted RBP11.4□□□□□ -0.58
NLRC3-202ENST00000359128 GEMIN2O14893 280 aaKnown RBP11.4□□□□□ -0.59
NLRC3-202ENST00000359128 ZNF737O75373 536 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 GGNBP1Q5YKI7 109 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 OR10G4Q8NGN3 311 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 PERPQ96FX8 193 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 C10orf90Q96M02 699 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 WIPI2Q9Y4P8 454 aa11.4□□□□□ -0.59
NLRC3-202ENST00000359128 RGPD3A6NKT7 1758 aaPredicted RBP11.4□□□□□ -0.59
NLRC3-202ENST00000359128 GSTZ1O43708 216 aaPredicted RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 PF4P02776 101 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 CCL8P80075 99 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 ZNF501Q96CX3 271 aaPredicted RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 SDK1Q7Z5N4 2213 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 ADAM11O75078 769 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 NTN1O95631 604 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 RPL31P62899 125 aaKnown RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 FAM219AQ8IW50 185 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 OR5A2Q8NGI9 324 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 TECRQ9NZ01 308 aaKnown RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 TEX50A0A1B0GTY4 177 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 ADRB1P08588 477 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 EIF4E3Q8N5X7 224 aaKnown RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 FLRT3Q9NZU0 649 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 ZFPL1O95159 310 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 RPS4Y1P22090 263 aaKnown RBP11.39□□□□□ -0.59
NLRC3-202ENST00000359128 OR8I2Q8N0Y5 310 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 OR2J1Q9GZK6 312 aa11.39□□□□□ -0.59
NLRC3-202ENST00000359128 WDR13Q9H1Z4 485 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms