RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ZNF581Q9P0T4 197 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 H3BUI4 141 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 PHF1O43189 567 aaPredicted RBP12.67□□□□□ -0.38
TPM1-206ENST00000358278 PSPNO60542 156 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 ZNF737O75373 536 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 TK1P04183 234 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 GRK1Q15835 563 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 WDR25Q64LD2 544 aaPredicted RBP12.67□□□□□ -0.38
TPM1-206ENST00000358278 SPNS3Q6ZMD2 512 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
TPM1-206ENST00000358278 SAMD12Q8N8I0 201 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 OR56B1Q8NGI3 324 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 SNX22Q96L94 193 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
TPM1-206ENST00000358278 A0A0A6YYD4 124 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 TRAV24A0A0B4J272 114 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 A6NHS1 94 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 FAM157AC9JC47 383 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 K7N7A8 449 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 LMO1P25800 156 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 BLVRBP30043 206 aaPredicted RBP12.66□□□□□ -0.38
TPM1-206ENST00000358278 TMEM249Q2WGJ8 235 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 RAB12Q6IQ22 244 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 ZNF841Q6ZN19 808 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 C17orf107Q6ZR85 190 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 GDPD3Q7L5L3 318 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 OR5D13Q8NGL4 314 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
TPM1-206ENST00000358278 PHF21AQ96BD5 680 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 NEDD4LQ96PU5 975 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
TPM1-206ENST00000358278 LPAR2Q9HBW0 351 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 PEX16Q9Y5Y5 336 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 HIVEP1P15822 2718 aa12.66□□□□□ -0.38
TPM1-206ENST00000358278 PDCD6O75340 191 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 FOXH1O75593 365 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 FUT3P21217 361 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 OR3A1P47881 315 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 LCN2P80188 198 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 DYNC1I2Q13409 638 aaKnown RBP12.65□□□□□ -0.38
TPM1-206ENST00000358278 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 ATXN7L3Q14CW9 347 aaPredicted RBP12.65□□□□□ -0.38
TPM1-206ENST00000358278 SIGIRRQ6IA17 410 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 FAM89BQ8N5H3 189 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 OR4S1Q8NGB4 309 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 SLC25A38Q96DW6 304 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 RCC2Q9P258 522 aaKnown RBP12.65□□□□□ -0.38
TPM1-206ENST00000358278 MCRIP1C9JLW8 97 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 MGST3O14880 152 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 GPR37O15354 613 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 SOCS1O15524 211 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 FCN3O75636 299 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 EDDM3BP56851 147 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
TPM1-206ENST00000358278 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 BPIFB2Q8N4F0 458 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 C6orf62Q9GZU0 229 aaPredicted RBP12.65□□□□□ -0.38
TPM1-206ENST00000358278 SHARPINQ9H0F6 387 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 PLEKHJ1Q9NW61 149 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 ING3Q9NXR8 418 aa12.65□□□□□ -0.38
TPM1-206ENST00000358278 A8MXK9 166 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 B4DSR2 109 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 RGS5O15539 181 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 SCGNO76038 276 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 CSN2P05814 226 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 CHATP28329 748 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 KCNJ3P48549 501 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 MOGAT2Q3SYC2 334 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 CD276Q5ZPR3 534 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 BTN2A1Q7KYR7 527 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 PIP4P2Q8N4L2 257 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 RAB3CQ96E17 227 aa12.64□□□□□ -0.39
TPM1-206ENST00000358278 SLIRPQ9GZT3 109 aaKnown RBP12.64□□□□□ -0.39
TPM1-206ENST00000358278 A0A075B6Q4 140 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 KIAA1324LA8MWY0 1029 aaPredicted RBP12.63□□□□□ -0.39
TPM1-206ENST00000358278 HPGDSO60760 199 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 ZFP36P26651 326 aaKnown RBP12.63□□□□□ -0.39
TPM1-206ENST00000358278 GZMKP49863 264 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 Q6ZTK2 550 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 CMTM4Q8IZR5 234 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 MCFD2Q8NI22 146 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 RAB40AQ8WXH6 277 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 ARHGAP5-AS1Q96IT6 56 aa12.63□□□□□ -0.39
TPM1-206ENST00000358278 F8P00451 2351 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms