RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MOGAT3Q86VF5 341 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 CMC2Q9NRP2 79 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 RGPD4Q7Z3J3 1758 aa15.36■□□□□ 0.05
COL27A1-201ENST00000356083 VDAC1P21796 283 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 AVPR2P30518 371 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 SSPNQ14714 243 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 GABRA6Q16445 453 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 LSMEM1Q8N8F7 131 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 TP53RKQ96S44 253 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 VN1R1Q9GZP7 353 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 LMO7DNF2Z398 122 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF32P17041 273 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 RPS4Y1P22090 263 aaKnown RBP15.35■□□□□ 0.05
COL27A1-201ENST00000356083 DYNLT3P51808 116 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 HIST3H3Q16695 136 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 LY6EQ16553 131 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 TMEM241Q24JQ0 296 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 CSNK1G1Q9HCP0 422 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 FCMRO60667 390 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 OR8G5Q8NG78 346 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 A0A087WUJ7 227 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 IGKV6-21A0A0C4DH24 114 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 CD96P40200 585 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 CLDN18P56856 261 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 FAM53AQ6NSI3 398 aaPredicted RBP15.35■□□□□ 0.05
COL27A1-201ENST00000356083 ZBTB44Q8NCP5 570 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 STARD4Q96DR4 205 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 TOLLIPQ9H0E2 274 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 LIMS3P0CW19 117 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 LIMS4P0CW20 117 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 KIR2DS2P43631 304 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 ITGB4P16144 1822 aa15.35■□□□□ 0.05
COL27A1-201ENST00000356083 RGS13O14921 159 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 GSCP56915 257 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-201ENST00000356083 PABPC1L2AQ5JQF8 200 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 FAM71E1Q6IPT2 247 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 LRRC61Q9BV99 259 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 SEC11CQ9BY50 192 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 CXXC4Q9H2H0 198 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 GHITMQ9H3K2 345 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 PCMT1P22061 227 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 SIGIRRQ6IA17 410 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 DND1Q8IYX4 353 aaKnown RBP15.34■□□□□ 0.05
COL27A1-201ENST00000356083 LRRC75AQ8NAA5 344 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 OR4P4Q8NGL7 312 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 FPR2P25090 351 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF273Q14593 569 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF738Q8NE65 137 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 GABARAPL3Q9BY60 117 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 FABP5Q01469 135 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 FMODQ06828 376 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 SNRNP40Q96DI7 357 aaKnown RBP15.34■□□□□ 0.05
COL27A1-201ENST00000356083 SFTA3P0C7M3 94 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 EMP1P54849 157 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 HSPB8Q9UJY1 196 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 MTCH2Q9Y6C9 303 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 IFITM5A6NNB3 132 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 OR5AC1P0C628 307 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 JUNBP17275 347 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-201ENST00000356083 DUSP18Q8NEJ0 188 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 OR4C13Q8NGP0 309 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 TMEM204Q9BSN7 226 aa15.34■□□□□ 0.05
COL27A1-201ENST00000356083 ACER2Q5QJU3 275 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 OR10A7Q8NGE5 316 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 MMP24Q9Y5R2 645 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 Q6ZSR9 355 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 LYSMD2Q8IV50 215 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 AQP10Q96PS8 301 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 NPAS1Q99742 590 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 CLN8Q9UBY8 286 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 SHPRHQ149N8 1683 aa15.33■□□□□ 0.05
COL27A1-201ENST00000356083 RECKO95980 971 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 RIGQ13278 110 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 FAM219BQ5XKK7 198 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 PELI3Q8N2H9 469 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 OR4X1Q8NH49 305 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 METTL26Q96S19 204 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 PSMB11A5LHX3 300 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 BTAF1O14981 1849 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 FFAR1O14842 300 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 IGFBP6P24592 240 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-201ENST00000356083 COMPP49747 757 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-201ENST00000356083 CENPVQ7Z7K6 275 aaPredicted RBP15.33■□□□□ 0.04
COL27A1-201ENST00000356083 SPEM1Q8N4L4 309 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 OR10G4Q8NGN3 311 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 OR10G9Q8NGN4 311 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 OR10G7Q8NGN6 311 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 RHNO1Q9BSD3 238 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 C20orf27Q9GZN8 174 aa15.33■□□□□ 0.04
COL27A1-201ENST00000356083 METTL12A8MUP2 240 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 MEOX2P50222 304 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 SLC35B1P78383 322 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 DOK1Q99704 481 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 IGKV6D-21A0A0A0MT36 114 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 AP4M1O00189 453 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 TCTEX1D1Q8N7M0 179 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 CYSLTR2Q9NS75 346 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 ACER3Q9NUN7 267 aa15.32■□□□□ 0.04
COL27A1-201ENST00000356083 TCF20Q9UGU0 1960 aaKnown RBP15.32■□□□□ 0.04
COL27A1-201ENST00000356083 MMP15P51511 669 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms