RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PDCD1Q15116 288 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 GRK1Q15835 563 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 PAN3Q58A45 887 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 BTNL3Q6UXE8 466 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 H1FXQ92522 213 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 ISOC1Q96CN7 298 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 HIF1ANQ9NWT6 349 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 ABRACLQ9P1F3 81 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 CEPT1Q9Y6K0 416 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 CR1P17927 2039 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 A0A0X1KG70 313 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 TMEM272A0A1B0GTI8 110 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 METTL21EPA6NDL7 271 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 CCDC160A6NGH7 325 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 ENSAO43768 121 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 FCN3O75636 299 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 GLAP06280 429 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 FUT3P21217 361 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 OR4M2Q8NGB6 313 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 NEDD4LQ96PU5 975 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 DPCDQ9BVM2 203 aaPredicted RBP12.88□□□□□ -0.35
TRIM13-201ENST00000356017 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 LPAR5Q9H1C0 372 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 KCNK15Q9H427 330 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 IGHV2-70DA0A0C4DH43 119 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 KIR2DS1A0A191URI9 304 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 ZNF701M0R085 212 aaPredicted RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 ERP29P30040 261 aaKnown RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 OR3A1P47881 315 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 RPL31P62899 125 aaKnown RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 FOXB2Q5VYV0 432 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 FAM89BQ8N5H3 189 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 SUMF2Q8NBJ7 301 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 OR4S1Q8NGB4 309 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 OR56B1Q8NGI3 324 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 C8orf46Q8TAG6 207 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 NDNFQ8TB73 568 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 PPA2Q9H2U2 334 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
TRIM13-201ENST00000356017 LPAR3Q9UBY5 353 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
TRIM13-201ENST00000356017 A0A0B4J203 849 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 SMIM31A0A1B0GVY4 71 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 C22orf46C9J442 243 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 H3BMQ9 156 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 PDCD6O75340 191 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 LY6G6DO95868 133 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 PPIAL4GP0DN37 164 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 SNRPBP14678 240 aaKnown RBP12.86□□□□□ -0.35
TRIM13-201ENST00000356017 SOX6P35712 828 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 EDDM3BP56851 147 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 PAX5Q02548 391 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 PAX2Q02962 417 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 KRTAP1-1Q07627 177 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 DYNC1I2Q13409 638 aaKnown RBP12.86□□□□□ -0.35
TRIM13-201ENST00000356017 RAB12Q6IQ22 244 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 AP3S1Q92572 193 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 MMP26Q9NRE1 261 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 RSL24D1Q9UHA3 163 aaKnown RBP12.86□□□□□ -0.35
TRIM13-201ENST00000356017 SPATA2Q9UM82 520 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 PEX16Q9Y5Y5 336 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 MAST4O15021 2626 aa12.86□□□□□ -0.35
TRIM13-201ENST00000356017 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
TRIM13-201ENST00000356017 J3QLI3 93 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 HSPB6O14558 160 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 SCGNO76038 276 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 PAHP00439 452 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 BLVRBP30043 206 aaPredicted RBP12.85□□□□□ -0.35
TRIM13-201ENST00000356017 P2RX3P56373 397 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
TRIM13-201ENST00000356017 EDDM3AQ14507 147 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 SPCS2Q15005 226 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
TRIM13-201ENST00000356017 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 LGALS14Q8TCE9 139 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 ACOT12Q8WYK0 555 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 DACT3Q96B18 629 aaPredicted RBP12.85□□□□□ -0.35
TRIM13-201ENST00000356017 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 SMR3AQ99954 134 aa12.85□□□□□ -0.35
TRIM13-201ENST00000356017 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms