RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 RCC2Q9P258 522 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 FKBP7Q9Y680 259 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 SIRPB1O00241 398 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 FGF16O43320 207 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 SLC35G6P0C7Q6 338 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CFL1P23528 166 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 GABRR1P24046 479 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 DEFB1P60022 68 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 PRPS1P60891 318 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CCDC36Q8IYA8 594 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 PRR18Q8N4B5 295 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OR52N5Q8NH56 324 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TSEN15Q8WW01 171 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 SLAMF6Q96DU3 332 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CNN2Q99439 309 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CRLF2Q9HC73 371 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TAS2R8Q9NYW2 309 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 RNF150Q9ULK6 438 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 KLF13Q9Y2Y9 288 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 A0A1W2PPR1 153 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 IGLV3-1P01715 115 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 TRGC2P03986 189 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 NUP62P37198 522 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 SKP1P63208 163 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 LINC00322Q6ZN03 302 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 GTPBP8Q8N3Z3 284 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 MEMO1Q9Y316 297 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 C5orf52A6NGY3 159 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CD5P06127 495 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 WNT2P09544 360 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 IL13RA1P78552 427 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CYB561D1Q8N8Q1 229 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 OR14K1Q8NGZ2 314 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 UQCC1Q9NVA1 299 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CTSZQ9UBR2 303 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 OSGIN2Q9Y236 505 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 SLC22A31A6NKX4 558 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 LINC00473A8K010 186 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 ZNF891A8MT65 544 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BKO60814 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 ITGA10O75578 1167 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BJP06899 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BOP23527 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BBP33778 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BDP58876 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BCP62807 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 ZNF33BQ06732 778 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST2H2BEQ16778 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 SPATS1Q496A3 300 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 OR4K17Q8NGC6 315 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 FRZBQ92765 325 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BHQ93079 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BNQ99877 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HIST1H2BMQ99879 126 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 GSX1Q9H4S2 264 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 ZNF160Q9HCG1 818 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 TMEM100Q9NV29 134 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 LAMP5Q9UJQ1 280 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 HDGFL3Q9Y3E1 203 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 MUC2Q02817 5179 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 A0A1B0GUH1 482 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 A0A1W2PRD5 423 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 A0A1W2PRF3 423 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 A0A1W2PRM7 423 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 NAPSAO96009 420 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CD8AP01732 235 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 CD79AP11912 226 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 OTX1P32242 354 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 PSG7Q13046 419 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 TRAPPC6BQ86SZ2 158 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 MDS2Q8NDY4 140 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 NT5CQ8TCD5 201 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 TNFAIP8L1Q8WVP5 186 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 RDH5Q92781 318 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 IMMP2LQ96T52 175 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 PRTFDC1Q9NRG1 225 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 MYOTQ9UBF9 498 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 FBXO9Q9UK97 447 aaPredicted RBP4.69□□□□□ -1.66
CD47-201ENST00000355354 STARD10Q9Y365 291 aa4.69□□□□□ -1.66
CD47-201ENST00000355354 C7orf77A4D0Y5 90 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 LIPT2A6NK58 231 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 LINC01548A6NM66 108 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ZNF716A6NP11 495 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 NSA2O95478 260 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 AGAP20933 346 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 LCN1P31025 176 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 FOXA3P55318 350 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 KLRB1Q12918 225 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 C1DQ13901 141 aaKnown RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 SURF2Q15527 256 aaPredicted RBP4.68□□□□□ -1.66
CD47-201ENST00000355354 HIST3H3Q16695 136 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 HIKESHIQ53FT3 197 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 LINC00173Q6ZV60 143 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 RNF133Q8WVZ7 376 aa4.68□□□□□ -1.66
CD47-201ENST00000355354 ITLN2Q8WWU7 325 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms