RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 AMER3Q8N944 861 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 ASB16Q96NS5 453 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMEM204Q9BSN7 226 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 GGACTQ9BVM4 153 aa11.25□□□□□ -0.61
SYNCRIP-201ENST00000355238 TRAV8-7A0A075B6U6 113 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 HELTA6NFD8 242 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 ALG1L2C9J202 215 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 PPYP01298 95 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 TWSG1Q9GZX9 223 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 SRSF10O75494 262 aaKnown RBP11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 P01737 135 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 CCR5P51681 352 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 PLP1P60201 277 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 LYZL2Q7Z4W2 148 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR8B12Q8NGG6 310 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 CCL4L1Q8NHW4 92 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 ADAMTS17Q8TE56 1095 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 GPR27Q9NS67 375 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 TREM2Q9NZC2 230 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 LINC01387J3KSC0 135 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 HAND1O96004 215 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 SKP2Q13309 424 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 HFEQ30201 348 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 PABPC1L2AQ5JQF8 200 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 ASB5Q8WWX0 329 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 MRGPRX3Q96LB0 322 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 SLC26A1Q9H2B4 701 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 PSG11Q9UQ72 335 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZFP30Q9Y2G7 519 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 NPIPB9F8W1W9 429 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 MMP9P14780 707 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 TAS2R60P59551 318 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.611e-7■■■■□ 21.6
SYNCRIP-201ENST00000355238 LINC00469Q8N7U9 141 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 H3BMH7 237 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 CTSVO60911 334 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 HOGA1Q86XE5 327 aa11.24□□□□□ -0.61
SYNCRIP-201ENST00000355238 NKX2-6A6NCS4 301 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 HIST1H1EP10412 219 aaKnown RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 DUSP2Q05923 314 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 SGMS2Q8NHU3 365 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 ADAT3Q96EY9 351 aaPredicted RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 MOGAT1Q96PD6 335 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 A0A1W2PN81 502 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR5B21A6NL26 309 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 RAB29O14966 203 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 PSG5Q15238 335 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 MESTQ5EB52 335 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 MTCH2Q9Y6C9 303 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMEM211Q6ICI0 200 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 TGIF2LXQ8IUE1 241 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 CDC42EP3Q9UKI2 254 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 CACNA1CQ13936 2221 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR52L2PQ8NGH6 319 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR4C12Q96R67 309 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 C6orf106Q9H6K1 298 aaPredicted RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 CA2P00918 260 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 GGTLC2Q14390 218 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 GABRA6Q16445 453 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 WDR74Q6RFH5 385 aaPredicted RBP11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 GAPTQ8N292 157 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 ELSPBP1Q96BH3 223 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR6C3Q9NZP0 311 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 DOK5Q9P104 306 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 KLK13Q9UKR3 277 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 NINQ8N4C6 2090 aa11.23□□□□□ -0.61
SYNCRIP-201ENST00000355238 RBP4P02753 201 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMIGD3P0DMS9 266 aaPredicted RBP11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 FABP2P12104 132 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 PPP2CBP62714 309 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 PPP2CAP67775 309 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 SPNS3Q6ZMD2 512 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 C10orf111Q8N326 155 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ASB10Q8WXI3 467 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 RREB1Q92766 1687 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 MELTFP08582 738 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 OR4P4Q8NGL7 312 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 P2RX4Q99571 388 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 HYAL3O43820 417 aaPredicted RBP11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 FAM157CP0CG43 387 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 ADTRPQ96IZ2 230 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 HSD17B10Q99714 261 aaKnown RBP11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 PROCRQ9UNN8 238 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 TMEM265A0A087WTH1 108 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 LILRA5A6NI73 299 aa11.22□□□□□ -0.61
SYNCRIP-201ENST00000355238 SIGLEC5O15389 551 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms