RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 ADAP1O75689 374 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 ZNF17P17021 662 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 TGIF1Q15583 401 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 OR5C1Q8NGR4 320 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 FAM103A1Q9BTL3 118 aaKnown RBP16.35■□□□□ 0.21
UBE3C-201ENST00000348165 NTF3P20783 257 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 PLPPR5Q32ZL2 321 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 BTNL3Q6UXE8 466 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 SAP30LQ9HAJ7 183 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 PARD6AQ9NPB6 346 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 ANXA10Q9UJ72 324 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 NCOR1O75376 2440 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
UBE3C-201ENST00000348165 ANKRD20A5PA0PJZ0 165 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 RAB5AP20339 215 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 STARD6P59095 220 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 Q56UQ5 140 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 RPL7L1Q6DKI1 246 aaKnown RBP16.35■□□□□ 0.21
UBE3C-201ENST00000348165 TRAT1Q6PIZ9 186 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 OR51I2Q9H344 312 aa16.35■□□□□ 0.21
UBE3C-201ENST00000348165 TRAV39A0A0B4J263 110 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 TRAV38-1A0A0B4J264 116 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 GATCO43716 136 aaKnown RBP16.34■□□□□ 0.21
UBE3C-201ENST00000348165 ERGP11308 486 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 SLC25A40Q8TBP6 338 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 UPK3AO75631 287 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 RPL29P47914 159 aaKnown RBP16.34■□□□□ 0.21
UBE3C-201ENST00000348165 VAMP8Q9BV40 100 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 A0A1W2PPQ1 181 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 SLC38A11Q08AI6 406 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 TIPARPQ7Z3E1 657 aaKnown RBP16.34■□□□□ 0.21
UBE3C-201ENST00000348165 PRR13Q9NZ81 148 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 ZNF785A8K8V0 405 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 OR5I1Q13606 314 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 NCR3LG1Q68D85 454 aa16.34■□□□□ 0.21
UBE3C-201ENST00000348165 MED19A0JLT2 244 aaPredicted RBP16.33■□□□□ 0.21
UBE3C-201ENST00000348165 BCL3P20749 454 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 COL19A1Q14993 1142 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 FGF11Q92914 225 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 RAB40CQ96S21 281 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 DUS4LO95620 317 aaKnown RBP16.33■□□□□ 0.21
UBE3C-201ENST00000348165 CTSBP07858 339 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 IL11P20809 199 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 PRRX1P54821 245 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 SAP25Q8TEE9 199 aa16.33■□□□□ 0.21
UBE3C-201ENST00000348165 G3V3Q6 166 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 M0R143 59 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 AP4M1O00189 453 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 PTP4A3O75365 173 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 CST4P01036 141 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 MRPS11P82912 194 aaKnown RBP16.33■□□□□ 0.2
UBE3C-201ENST00000348165 AKAP6Q13023 2319 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.2
UBE3C-201ENST00000348165 MPC2O95563 127 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 MMP16P51512 607 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 RAG2P55895 527 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 LYPD8Q6UX82 237 aa16.33■□□□□ 0.2
UBE3C-201ENST00000348165 ACSM6Q6P461 480 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 PRSS27Q9BQR3 290 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 MARVELD1Q9BSK0 173 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 CDX4O14627 284 aaPredicted RBP16.32■□□□□ 0.2
UBE3C-201ENST00000348165 PJVKQ0ZLH3 352 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 SLC25A30Q5SVS4 291 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 MMP26Q9NRE1 261 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 TMEM74BQ9NUR3 256 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 FFAR4Q5NUL3 377 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 MDP1Q86V88 176 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 SPICQ8N5J4 248 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 LINC00862A6NCI5 91 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 C16orf97H3BN30 126 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 HAND1O96004 215 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 PTTG1IPP53801 180 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 PRSS53Q2L4Q9 553 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 LYRM2Q9NU23 88 aaPredicted RBP16.32■□□□□ 0.2
UBE3C-201ENST00000348165 PILRBQ9UKJ0 227 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 RGPD4Q7Z3J3 1758 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 DNPH1O43598 174 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 RTP5Q14D33 572 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 MIDNQ504T8 468 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 FAM209BQ5JX69 171 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 TMEM251Q8N6I4 163 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 MMP24Q9Y5R2 645 aa16.32■□□□□ 0.2
UBE3C-201ENST00000348165 DBX1A6NMT0 343 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 CCL21O00585 134 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 LY86O95711 162 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 MMP7P09237 267 aaPredicted RBP16.31■□□□□ 0.2
UBE3C-201ENST00000348165 CNN1P51911 297 aaKnown RBP16.31■□□□□ 0.2
UBE3C-201ENST00000348165 TOMM20LQ6UXN7 152 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 FAM24BQ8N5W8 94 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 OR2C3Q8N628 320 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 ADAT3Q96EY9 351 aaPredicted RBP16.31■□□□□ 0.2
UBE3C-201ENST00000348165 GMPPAQ96IJ6 420 aaPredicted RBP16.31■□□□□ 0.2
UBE3C-201ENST00000348165 SLC35D1Q9NTN3 355 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 ZNHIT1O43257 154 aa16.31■□□□□ 0.2
UBE3C-201ENST00000348165 POLR2GP62487 172 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE3C-201ENST00000348165 LILRB1Q8NHL6 650 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms