RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CNOT4O95628 575 aaKnown RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 CRYABP02511 175 aaKnown RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 S100A9P06702 114 aaKnown RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 RAC2P15153 192 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SPCS3P61009 180 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 TBR1Q16650 682 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 C2orf68Q2NKX9 166 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 EIF2S3LQ2VIR3 472 aaKnown RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 CEACAM21Q3KPI0 293 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 INO80CQ6PI98 192 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 OSR2Q8N2R0 312 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 MUC20Q8N307 709 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 C9orf62Q8N4C0 152 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 OR5L1Q8NGL2 311 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 DYRK2Q92630 601 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SLAMF9Q96A28 289 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 PRRT1Q99946 306 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SLC25A21Q9BQT8 299 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 TCEAL7Q9BRU2 100 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 FAAP24Q9BTP7 215 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF436Q9C0F3 470 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 OPA3Q9H6K4 179 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 CDH20Q9HBT6 801 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF71Q9NQZ8 489 aaPredicted RBP7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SLC2A8Q9NY64 477 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 IL36GQ9NZH8 169 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 MGAT4CQ9UBM8 478 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 PROCRQ9UNN8 238 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 IGKV1D-8A0A087WSZ0 117 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 hCG_1807616A0A1W2PRN6 198 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR2AT4A6NND4 320 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 SERPINE3A8MV23 424 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 F8VVB4 439 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 F8VWA3 439 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 WDR1O75083 606 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 BCL3P20749 454 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 MPZP25189 248 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 PCP4P48539 62 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 SNU13P55769 128 aaKnown RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 DAZAP2Q15038 168 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 HOGA1Q86XE5 327 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 UXS1Q8NBZ7 420 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR11H4Q8NGC9 324 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR10AD1Q8NGE0 317 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 EMG1Q92979 244 aaKnown RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 SULT4A1Q9BR01 284 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 CHIAQ9BZP6 476 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR2J1Q9GZK6 312 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 FN3KRPQ9HA64 309 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 DLL4Q9NR61 685 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 UBQLN2Q9UHD9 624 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 AK3Q9UIJ7 227 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 ST3GAL6Q9Y274 331 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF729A6NN14 1252 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 ANKRD30BLA7E2S9 258 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 K7ENP7 123 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 IFNA6P05013 189 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 FBP1P09467 338 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR4E1P0C645 316 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 CBR1P16152 277 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 CA6P23280 308 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 CHATP28329 748 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 PPP1CBP62140 327 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 COTL1Q14019 142 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 C1orf185Q5T7R7 199 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 FAM180AQ6UWF9 173 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 EIF4E3Q8N5X7 224 aaKnown RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 Q8NA96 180 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 OR5P3Q8WZ94 311 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF701Q9NV72 531 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-202ENST00000345734 NPTNQ9Y639 398 aa7.88□□□□□ -1.15
ATG4A-202ENST00000345734 SMG1Q96Q15 3661 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SDCBPO00560 298 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 AKR7A2O43488 359 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SYNGR1O43759 233 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SIX6O95475 246 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 IGKV3-15P01624 115 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 TBPP20226 339 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 RBM11P57052 281 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SNRPD2P62316 118 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SRSF2Q01130 221 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 FGL1Q08830 312 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MRPL49Q13405 166 aaKnown RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ALKBH6Q3KRA9 238 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 VAX1Q5SQQ9 334 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF324BQ6AW86 544 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 BHLHA15Q7RTS1 189 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 FTMTQ8N4E7 242 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SPICQ8N5J4 248 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 OR5A2Q8NGI9 324 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 OR5H2Q8NGV7 314 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SLC25A40Q8TBP6 338 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 HIST1H2AAQ96QV6 131 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 ALX4Q9H161 411 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-202ENST00000345734 MTCH1Q9NZJ7 389 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 PIPOXQ9P0Z9 390 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 IL36RNQ9UBH0 155 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 SHANK1Q9Y566 2161 aa7.87□□□□□ -1.15
ATG4A-202ENST00000345734 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms