RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CAPSLQ8WWF8 208 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 STMN2Q93045 179 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 OR5M11Q96RB7 305 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 PDCD1LG2Q9BQ51 273 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 GAL3ST2Q9H3Q3 398 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 INPP5EQ9NRR6 644 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 NECAP2Q9NVZ3 263 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 FAM118AQ9NWS6 357 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 ERVK13-1Q9NX77 482 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 UBE2J1Q9Y385 318 aaPredicted RBP10.01□□□□□ -0.81
SGCA-202ENST00000344627 MINOS1-NBL1R4GNA1 71 aa10.01□□□□□ -0.81
SGCA-202ENST00000344627 MEGF11A6BM72 1044 aa10□□□□□ -0.81
SGCA-202ENST00000344627 A6NDX4 124 aa10□□□□□ -0.81
SGCA-202ENST00000344627 E9PI62 339 aa10□□□□□ -0.81
SGCA-202ENST00000344627 E9PQ18 207 aa10□□□□□ -0.81
SGCA-202ENST00000344627 G3V4G9 280 aa10□□□□□ -0.81
SGCA-202ENST00000344627 HSPB6O14558 160 aa10□□□□□ -0.81
SGCA-202ENST00000344627 SULT1B1O43704 296 aa10□□□□□ -0.81
SGCA-202ENST00000344627 MMP23AO75900 390 aa10□□□□□ -0.81
SGCA-202ENST00000344627 KDM4BO94953 1096 aa10□□□□□ -0.81
SGCA-202ENST00000344627 ALX3O95076 343 aa10□□□□□ -0.81
SGCA-202ENST00000344627 GABRB1P18505 474 aa10□□□□□ -0.81
SGCA-202ENST00000344627 CDK2P24941 298 aa10□□□□□ -0.81
SGCA-202ENST00000344627 HTR1DP28221 377 aa10□□□□□ -0.81
SGCA-202ENST00000344627 ERP29P30040 261 aaKnown RBP10□□□□□ -0.81
SGCA-202ENST00000344627 GLIPR1P48060 266 aa10□□□□□ -0.81
SGCA-202ENST00000344627 SOX2P48431 317 aa10□□□□□ -0.81
SGCA-202ENST00000344627 MRPL28Q13084 256 aaKnown RBP10□□□□□ -0.81
SGCA-202ENST00000344627 KISS1Q15726 138 aa10□□□□□ -0.81
SGCA-202ENST00000344627 OR52W1Q6IF63 320 aa10□□□□□ -0.81
SGCA-202ENST00000344627 CCBE1Q6UXH8 406 aaPredicted RBP10□□□□□ -0.81
SGCA-202ENST00000344627 C16orf82Q7Z2V1 217 aa10□□□□□ -0.81
SGCA-202ENST00000344627 ABHD12Q8N2K0 398 aa10□□□□□ -0.81
SGCA-202ENST00000344627 AKR1E2Q96JD6 320 aa10□□□□□ -0.81
SGCA-202ENST00000344627 FAM192AQ9GZU8 254 aa10□□□□□ -0.81
SGCA-202ENST00000344627 ZNF702PQ9H963 129 aa10□□□□□ -0.81
SGCA-202ENST00000344627 TOR1AO14656 332 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 ZFPL1O95159 310 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 RAB3AP20336 220 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 NFYBP25208 207 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 PTGFRP43088 359 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 ARHGDIBP52566 201 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 GTF2A1P52655 376 aaPredicted RBP9.99□□□□□ -0.81
SGCA-202ENST00000344627 LOXL3P58215 753 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 IL18R1Q13478 541 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 ATXN7L3Q14CW9 347 aaPredicted RBP9.99□□□□□ -0.81
SGCA-202ENST00000344627 ZNF691Q5VV52 312 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 BAIAP2L2Q6UXY1 529 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 OR4D6Q8NGJ1 314 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 RHOFQ9HBH0 211 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
SGCA-202ENST00000344627 ODAMA1E959 279 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 H0YJX3 145 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 SLC33A1O00400 549 aaPredicted RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 DUS4LO95620 317 aaKnown RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 CD24P25063 80 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 VDAC2P45880 294 aaPredicted RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 RBM39Q14498 530 aaKnown RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 RSU1Q15404 277 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 SMN1Q16637 294 aaKnown RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 PAN3Q58A45 887 aaKnown RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 Q6P435 159 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 TMPRSS11AQ6ZMR5 421 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 RTN4RL2Q86UN3 420 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 TNFAIP8L1Q8WVP5 186 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 CYGBQ8WWM9 190 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 CPNE2Q96FN4 548 aaPredicted RBP9.98□□□□□ -0.81
SGCA-202ENST00000344627 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 SERTAD4Q9NUC0 356 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 ING4Q9UNL4 249 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
SGCA-202ENST00000344627 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 HTR3BO95264 441 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 CD2P06729 351 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 CD28P10747 220 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 LMO1P25800 156 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 BRS3P32247 399 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 GLP1RP43220 463 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 MTNR1BP49286 362 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 PRRX1P54821 245 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 ZP1P60852 638 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 BLCAPP62952 87 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 PPP3R1P63098 170 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 LTC4SQ16873 150 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 LRRC36Q1X8D7 754 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 HEPN1Q6WQI6 88 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 Q6ZPA2 131 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 OR10K1Q8NGX5 313 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 HAVCR2Q8TDQ0 301 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 WIPF2Q8TF74 440 aaPredicted RBP9.97□□□□□ -0.81
SGCA-202ENST00000344627 APH1BQ8WW43 257 aa9.97□□□□□ -0.81
SGCA-202ENST00000344627 CORO2AQ92828 525 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms