RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SLC25A11Q02978 314 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 IL17AQ16552 155 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 Q499Y3 187 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 GPR21Q99679 349 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM147Q9BVK8 224 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PPIHO43447 177 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 FGF5P12034 268 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 PAFAH1B3Q15102 231 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 RNPS1Q15287 305 aaKnown RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 Q6ZVU0 165 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SLC6A18Q96N87 628 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 COL1A2P08123 1366 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 IGF2P01344 180 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 IGKV5-2P06315 115 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H1AQ02539 215 aaPredicted RBP3.36□□□□□ -1.87
SYNE2-202ENST00000344113 MMDQ15546 238 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 SLCO4C1Q6ZQN7 724 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 OR4C3Q8NH37 302 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 AQP3Q92482 292 aa3.36□□□□□ -1.87
SYNE2-202ENST00000344113 A0A087WUU8 490 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 DPRXA6NFQ7 191 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 KLRC4-KLRK1H3BQV0 150 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 IGHA1P01876 353 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 BCL2P10415 239 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ARRDC3Q96B67 414 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ATP5LO75964 103 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PSG5Q15238 335 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM144Q7Z5S9 345 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CHST13Q8NET6 341 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ORAI2Q96SN7 254 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TBX5Q99593 518 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 HEATR5AQ86XA9 2040 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CSRP3P50461 194 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 D2HGDHQ8N465 521 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZCCHC10Q8TBK6 192 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PERPQ96FX8 193 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 C1QTNF6Q9BXI9 259 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ISG20L2Q9H9L3 353 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF816Q0VGE8 651 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SPRED2Q7Z698 418 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A42Q86VD7 318 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 DNAJC30Q96LL9 226 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM56Q96MV1 263 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CACNG5Q9UF02 275 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF835Q9Y2P0 537 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 C1QAP02745 245 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 FURINP09958 794 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ORM2P19652 201 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR9G1Q8NH87 305 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 HS3ST2Q9Y278 367 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 DIP2BQ9P265 1576 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SCN5AQ14524 2016 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 A8MWL6 223 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 FOXE1O00358 373 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SDCBPO00560 298 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 FOXL1Q12952 345 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 KLF9Q13886 244 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 C15orf39Q6ZRI6 1047 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PIGCQ92535 297 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TNS2Q63HR2 1409 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LRRC3CA6NJW4 275 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LYRM9A8MSI8 78 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CAMPP49913 170 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 DLX2Q07687 328 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 RPEQ96AT9 228 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM186Q96B77 213 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 FAM103A1Q9BTL3 118 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LPAR5Q9H1C0 372 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LSM2Q9Y333 95 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM88BA6NKF7 163 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MAVSQ7Z434 540 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LINC00116Q8NCU8 138 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 WNT2BQ93097 391 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 C19orf24Q9BVV8 132 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SELENOIQ9C0D9 397 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 GPR84Q9NQS5 396 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 UTS2RQ9UKP6 389 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 GVINP1Q7Z2Y8 2422 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LANCL1O43813 399 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CXorf1O96002 111 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 IGHA2P01877 340 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF140P52738 457 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 EFNB2P52799 333 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SRYQ05066 204 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ELAVL1Q15717 326 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LIAT1Q6ZQX7 453 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MARCH1Q8TCQ1 289 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CEACAM18A8MTB9 384 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SLC25A14O95258 325 aaPredicted RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS54Q6PEW0 395 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR5AN1Q8NGI8 311 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 C8orf46Q8TAG6 207 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LGALS14Q8TCE9 139 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ACER1Q8TDN7 264 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR8B2Q96RD0 313 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 NBASA2RRP1 2371 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF593O00488 134 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms