RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 DKKL1Q9UK85 242 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 A8MVM7 634 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 TAPBPO15533 448 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 ZNF264O43296 627 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CPSF4O95639 269 aaKnown RBP6.29□□□□□ -1.4
ZNF540-202ENST00000343599 OR8U9P0C7N5 309 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 EPORP19235 508 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 HTR1FP30939 366 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 RPL29P47914 159 aaKnown RBP6.29□□□□□ -1.4
ZNF540-202ENST00000343599 RAC3P60763 192 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 ARF6P62330 175 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PMP22Q01453 160 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 GUK1Q16774 197 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 C1orf87Q8N0U7 546 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CDS1Q92903 461 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 PRAP1Q96NZ9 151 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 MIEN1Q9BRT3 115 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CXorf36Q9H7Y0 433 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 ADGRL4Q9HBW9 690 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 UNC79Q9P2D8 2635 aa6.29□□□□□ -1.4
ZNF540-202ENST00000343599 CHD8Q9HCK8 2581 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 A0A1B0GW64 132 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 NME6O75414 186 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 LRATO95237 230 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 GBAP04062 536 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 PGA3P0DJD8 388 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 NAA10P41227 235 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 RPS20P60866 119 aaKnown RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 RPS13P62277 151 aaKnown RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 HSF1Q00613 529 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ATXN7L3Q14CW9 347 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 DUSP5Q16690 384 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 UNQ9370/PRO34162Q6UXP9 181 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 LIAT1Q6ZQX7 453 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 DOK3Q7L591 496 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 LINC00471Q8N535 108 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 OR5D18Q8NGL1 313 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 RAB40AQ8WXH6 277 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 THRSPQ92748 146 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TMEM19Q96HH6 336 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 PGLYRP3Q96LB9 341 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TP53RKQ96S44 253 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 C20orf144Q9BQM9 153 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 PIMREGQ9BSJ6 248 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ELOVL1Q9BW60 279 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ARL15Q9NXU5 204 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SLC2A8Q9NY64 477 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 B3GAT1Q9P2W7 334 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 UPB1Q9UBR1 384 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 MTFP1Q9UDX5 166 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SPEGQ15772 3267 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 A0A0B4J2A0 478 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 NKX2-6A6NCS4 301 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TVP23AA6NH52 213 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 UNC119BA6NIH7 251 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 CCSO14618 274 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TRAF3IP2O43734 574 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ETHE1O95571 254 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SMIM11AP58511 58 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TAS2R43P59537 309 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ERVFRD-1P60508 538 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 CSNK2A1P68400 391 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 RPL19P84098 196 aaKnown RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 CLEC12BQ2HXU8 276 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ACSM3Q53FZ2 586 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 ALG10BQ5I7T1 473 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 VWA1Q6PCB0 445 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 OR14K1Q8NGZ2 314 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 NFKBIDQ8NI38 313 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 FAM46AQ96IP4 442 aaKnown RBP6.28□□□□□ -1.4
ZNF540-202ENST00000343599 VPS25Q9BRG1 176 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SLCO5A1Q9H2Y9 848 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 Q9N2J8 555 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SHPKQ9UHJ6 478 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 KCNS2Q9ULS6 477 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 SLC7A11Q9UPY5 501 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 CEP295Q9C0D2 2601 aa6.28□□□□□ -1.4
ZNF540-202ENST00000343599 TRAV39A0A0B4J263 110 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 AGPAT2O15120 278 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CYB5BO43169 146 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PHF1O43189 567 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 HPRT1P00492 218 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CSTAP01040 98 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PDYNP01213 254 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 MBPP02686 304 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CELA3BP08861 270 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PIRTP0C851 137 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 LYL1P12980 280 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 GSTM3P21266 225 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CD34P28906 385 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 S100A7P31151 101 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 APOBEC1P41238 236 aaKnown RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 EMDP50402 254 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF41P51814 821 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 IL13RA1P78552 427 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 LRRC37A5PQ49AS3 106 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms