RNA–Protein interactions for RNA: ENST00000341400.11

NPIPB4-202, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-202ENST00000341400 TMEM234Q8WY98 164 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 CDKL2Q92772 493 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 MAGOHBQ96A72 148 aaKnown RBP4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF799Q96GE5 643 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 TEAD3Q99594 435 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 TSNAXQ99598 290 aaKnown RBP4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 TREM1Q9NP99 234 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 TREX1Q9NSU2 369 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF257Q9Y2Q1 563 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 SNX10Q9Y5X0 201 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 TMEM131Q92545 1883 aa4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 COL5A1P20908 1838 aaPredicted RBP4.32□□□□□ -1.72
NPIPB4-202ENST00000341400 DOCK9Q9BZ29 2069 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF106Q9H2Y7 1883 aaKnown RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 CNOT1A5YKK6 2376 aaKnown RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 A0A0A6YYD5 115 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 IGHV1OR15-9A0A0B4J2B8 117 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 A0A1W2PQ67 120 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 WI2-2373I1.2A0A1W2PRP0 233 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 C10orf142B7Z368 130 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 DNASE2O00115 360 aaPredicted RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 MFSD11O43934 449 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ALOX12BO75342 701 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ZMPSTE24O75844 475 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 PTTG1O95997 202 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF806P0C7X5 589 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 IFFO1Q0D2I5 559 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 TRIP13Q15645 432 aaPredicted RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 CST6Q15828 149 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 TAL2Q16559 108 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 TTMPQ5BVD1 217 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 C9orf64Q5T6V5 341 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 C22orf39Q6P5X5 142 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 CDKL3Q8IVW4 592 aaPredicted RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF433Q8N7K0 673 aaPredicted RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 LGALS14Q8TCE9 139 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 IFT81Q8WYA0 676 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 CAMK2N2Q96S95 79 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 HSD17B10Q99714 261 aaKnown RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ULBP2Q9BZM5 246 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 LRRC19Q9H756 370 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 SNX24Q9Y343 169 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 KLF12Q9Y4X4 402 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 WSB1Q9Y6I7 421 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 SDK1Q7Z5N4 2213 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ZFC3H1O60293 1989 aaKnown RBP4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 LRP4O75096 1905 aa4.31□□□□□ -1.72
NPIPB4-202ENST00000341400 ASCC3Q8N3C0 2202 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 CABIN1Q9Y6J0 2220 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 CROCCQ5TZA2 2017 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 A0A0D9SEW6 157 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 IGHV5-10-1A0A0J9YXX1 117 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 ANKRD20A5PA0PJZ0 165 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 TMX2-CTNND1H3BSU7 103 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 BANF1O75531 89 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 SC5DO75845 299 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 TTC4O95801 387 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 SHBGP04278 402 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 IGHV1-8P0DP01 117 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 KDELR1P24390 212 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 GNRHRP30968 328 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 ZNF133P52736 654 aaPredicted RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 AP1S1P61966 158 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 RPL23P62829 140 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 PAFAH1B3Q15102 231 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 RBMY1FQ15415 496 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 OR1Q1Q15612 314 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 USF2Q15853 346 aaPredicted RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 NCBP2-AS2Q69YL0 99 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 OR6K2Q8NGY2 324 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 ACTL9Q8TC94 416 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 FAM104AQ969W3 186 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 PTX4Q96A99 478 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 RDH12Q96NR8 316 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 FRMD8P1Q9BZ68 369 aaPredicted RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 TPK1Q9H3S4 243 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 DHX35Q9H5Z1 703 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 CFL2Q9Y281 166 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 KNL1Q8NG31 2342 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 PCNX2A6NKB5 2137 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 TDRD6O60522 2096 aaKnown RBP4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 PIKFYVEQ9Y2I7 2098 aa4.3□□□□□ -1.72
NPIPB4-202ENST00000341400 TRAV8-7A0A075B6U6 113 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 A0A096LNJ9 63 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 TVP23AA6NH52 213 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 GATCO43716 136 aaKnown RBP4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 CST8O60676 142 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 UPK1BO75841 260 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 PSG2P11465 335 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 HLA-EP13747 358 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 SPAM1P38567 509 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 KCNJ3P48549 501 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 MNAT1P51948 309 aa4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 RPL26P61254 145 aaKnown RBP4.29□□□□□ -1.72
NPIPB4-202ENST00000341400 RHOAP61586 193 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms