RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CD74P04233 296 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PAN3Q58A45 887 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PLET1Q6UQ28 207 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 BEST4Q8NFU0 473 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR4K15Q8NH41 348 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PLEKHA6Q9Y2H5 1048 aa12.4□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IGKV1D-8A0A087WSZ0 117 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 A6NNC1 897 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PMP2P02689 132 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CSN2P05814 226 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 GLAP06280 429 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FCGR3AP08637 254 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IRF2P14316 349 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 AMY2BP19961 511 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CD80P33681 288 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 HRH1P35367 487 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RBM39Q14498 530 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MICBQ29980 383 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF782Q6ZMW2 699 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C12orf4Q9NQ89 552 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 WIPI2Q9Y4P8 454 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 NPTNQ9Y639 398 aa12.39□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR2AT4A6NND4 320 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF205O95201 554 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TCRBP04435 133 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 AMY2AP04746 511 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PSG2P11465 335 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DTYMKP23919 212 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RNASE10Q5GAN6 216 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 Q6ZPA2 131 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CD177Q8N6Q3 437 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR51S1Q8NGJ8 323 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 UPRTQ96BW1 309 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PPA2Q9H2U2 334 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PSPNO60542 156 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CD8AP01732 235 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 HPXP02790 462 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SOD3P08294 240 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ZNF735P0CB33 412 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 LMO1P25800 156 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 COL10A1Q03692 680 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MEF2DQ14814 521 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FAM90A1Q86YD7 464 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 HPS1Q92902 700 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SLC6A7Q99884 636 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CHST6Q9GZX3 395 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TANC2Q9HCD6 1990 aa12.38□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DSCAMO60469 2012 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IGKV1D-17A0A075B6S4 117 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TRAV6A0A075B6T7 132 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 LRRC30A6NM36 301 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IFNL4K9M1U5 179 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 NAPSAO96009 420 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PRDX2P32119 198 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RSBN1Q5VWQ0 802 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR5H2Q8NGV7 314 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PLPPR1Q8TBJ4 325 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 NUDT15Q9NV35 164 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 EDARQ9UNE0 448 aa12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RAI1Q7Z5J4 1906 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DANCRP0C864 163 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TBPP20226 339 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 GABRA2P47869 451 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 PPOXP50336 477 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 RAB25P57735 213 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ATXN7L3Q14CW9 347 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CHRFAM7AQ494W8 412 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 C11orf71Q6IPW1 123 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 DEFB108BQ8NET1 73 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR5AP2Q8NGF4 316 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MRPL30Q8TCC3 161 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 CCL17Q92583 94 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MARVELD1Q9BSK0 173 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 NUBP2Q9Y5Y2 271 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FLNCQ14315 2725 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 USP9XQ93008 2570 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 FAM208BQ5VWN6 2430 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TMEM82A0PJX8 343 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 IFNA6P05013 189 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 OR3A3P47888 321 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 TAS2R46P59540 309 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 ARPC4P59998 168 aa12.36□□□□□ -0.43
CDK5RAP3-201ENST00000338399 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms