RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMPRSS11DO60235 418 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 CTNSO60931 367 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 P2RY2P41231 377 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SMAD4Q13485 552 aaKnown RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 OSTM1Q86WC4 334 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ABHD14BQ96IU4 210 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ENTPD2Q9Y5L3 495 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 C5orf49A4QMS7 147 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 CCR2P41597 374 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 JMJD6Q6NYC1 403 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 KCND3Q9UK17 655 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 LAIR1Q6GTX8 287 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 OR52N4Q8NGI2 321 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 HIST1H4GQ99525 98 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 RNF39Q9H2S5 420 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 SBF1O95248 1867 aa9.26□□□□□ -0.93
SPTBN1-201ENST00000333896 TRBV23-1A0A0A0MS06 115 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 FXYD1O00168 92 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 IGF2P01344 180 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 RBM11P57052 281 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 RIPPLY3P57055 190 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 CKS1BP61024 79 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 HERPUD1Q15011 391 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ALKBH6Q3KRA9 238 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MS4A6EQ96DS6 147 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 KCNE5Q9UJ90 142 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 PLXNB2O15031 1838 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 PRDX4Q13162 271 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MRPL54Q6P161 138 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 HTR3DQ70Z44 454 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 RPS4Y2Q8TD47 263 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 EPHX3Q9H6B9 360 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MMP17Q9ULZ9 603 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 NYNRINQ9P2P1 1898 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 A0A1B0GW15 77 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 UBE2L6O14933 153 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 EDN1P05305 212 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MMP9P14780 707 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF511Q8NB15 262 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 BCL2L10Q9HD36 194 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 HINT3Q9NQE9 182 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 PCDH15Q96QU1 1955 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 SOX4Q06945 474 aaPredicted RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 C16orf82Q7Z2V1 217 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 OR52E1Q8NGJ3 308 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 PP6455Q8WZ26 134 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ZDHHC16Q969W1 377 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 C1QTNF6Q9BXI9 259 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 TECRQ9NZ01 308 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 XIRP1Q702N8 1843 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 TMED7-TICAM2A0A0A6YYA0 188 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 RIGQ13278 110 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 SPACA5Q96QH8 159 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MBNL1Q9NR56 388 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 EML6Q6ZMW3 1958 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 MASP2O00187 686 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 AVPR2P30518 371 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 CTAG1AP78358 180 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 LBX2Q6XYB7 198 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 OR8B3Q8NGG8 313 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 C11orf40Q8WZ69 217 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ABHD3Q8WU67 409 aa9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF764Q96H86 408 aaPredicted RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 ISG20L2Q9H9L3 353 aaKnown RBP9.25□□□□□ -0.93
SPTBN1-201ENST00000333896 J3KRW8 73 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 PLA2G10O15496 165 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 DNAL4O96015 105 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 CST5P28325 142 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ACVR1Q04771 509 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 DUSP8Q13202 625 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 SHBQ15464 509 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 PRSS8Q16651 343 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 CAMKMTQ7Z624 323 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 LCORQ96JN0 433 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 CDX2Q99626 313 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 SERTM1A2A2V5 107 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 METAP1P53582 386 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 STARD6P59095 220 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 LPAL2Q16609 132 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 IL17CQ9P0M4 197 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF391Q9UJN7 358 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 PSG11Q9UQ72 335 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 COA3Q9Y2R0 106 aaPredicted RBP9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ATP23Q9Y6H3 246 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 PLXND1Q9Y4D7 1925 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 NPIPB8E9PQR5 432 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 NPIPB7O75200 414 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ZNF79Q15937 498 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ACER2Q5QJU3 275 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 MED25Q71SY5 747 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 RDH5Q92781 318 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 ADTRPQ96IZ2 230 aa9.24□□□□□ -0.93
SPTBN1-201ENST00000333896 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms