RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 PARP11Q9NR21 331 aa11.55□□□□□ -0.56
TUBA1B-201ENST00000332858 IL36GQ9NZH8 169 aa11.55□□□□□ -0.56
TUBA1B-201ENST00000332858 NDRG3Q9UGV2 375 aa11.55□□□□□ -0.56
TUBA1B-201ENST00000332858 MEX3AA1L020 520 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 E5RGE8 158 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 NEURL1O76050 574 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 NGFP01138 241 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 PPYP01298 95 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 GNRHRP30968 328 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 PCBD1P61457 104 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 ESPL1Q14674 2120 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 C6orf15Q6UXA7 325 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 FBXW12Q6X9E4 464 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 HPSE2Q8WWQ2 592 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 CPNE4Q96A23 557 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 SPSB4Q96A44 273 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 RGCCQ9H4X1 137 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 NSG2Q9Y328 171 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 C5orf49A4QMS7 147 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 SERPINA7P05543 415 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 SCTP09683 121 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 FLI1Q01543 452 aaPredicted RBP11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 LRTM2Q8N967 370 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 MLXQ9UH92 298 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 PRELID3BQ9Y3B1 194 aa11.54□□□□□ -0.56
TUBA1B-201ENST00000332858 A0A1B0GV50 99 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 FAM166BA8MTA8 275 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 B4E171 279 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 F2RL1P55085 397 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 SSPNQ14714 243 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 TSC22D1Q15714 1073 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 MIDNQ504T8 468 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 COLCA1Q6ZS62 124 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 HSD17B11Q8NBQ5 300 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 EXTL1Q92935 676 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PLEKHA2Q9HB19 425 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PARPBPQ9NWS1 579 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PLA2G3Q9NZ20 509 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 A0A1W2PNU3 283 aaPredicted RBP11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 NKX2-6A6NCS4 301 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 SLC33A1O00400 549 aaPredicted RBP11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 CRYBA1P05813 215 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 LHX2P50458 406 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PPT1P50897 306 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 C3AR1Q16581 482 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 C2CD4CQ8TF44 421 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 RSRP1Q9BUV0 290 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 SCRT1Q9BWW7 348 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 MTCH1Q9NZJ7 389 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 RCL1Q9Y2P8 373 aaKnown RBP11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 R4GN57 208 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 LILRA1O75019 489 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 ZNF616Q08AN1 781 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PRDX4Q13162 271 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 TMEM211Q6ICI0 200 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 OR10Z1Q8NGY1 313 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 ARV1Q9H2C2 271 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 ZNF391Q9UJN7 358 aa11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
TUBA1B-201ENST00000332858 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 MPPED1O15442 326 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 IGHEP01854 428 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 MAGEA5P43359 124 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 HERV-K104P61576 105 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 ZNF528Q3MIS6 628 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 FAM76BQ5HYJ3 339 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 LGI3Q8N145 548 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 ZNF488Q96MN9 340 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 PQLC2LA1A4F0 135 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 J3KRW8 73 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 SPP1P10451 314 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 CLDN18P56856 261 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 RAB11FIP2Q7L804 512 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 MED12LQ86YW9 2145 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 C1orf210Q8IVY1 113 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 LINC00518Q8N0U6 118 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 OR2M7Q8NG81 312 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 ZFP57Q9NU63 452 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 FOXJ2Q9P0K8 574 aa11.52□□□□□ -0.57
TUBA1B-201ENST00000332858 PRR14LQ5THK1 2151 aa11.51□□□□□ -0.57
TUBA1B-201ENST00000332858 FAM24AA6NFZ4 105 aa11.51□□□□□ -0.57
TUBA1B-201ENST00000332858 C9orf172C9J069 976 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms