RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PTAFRP25105 342 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 NPBWR2P48146 333 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 KDF1Q8NAX2 398 aaPredicted RBP13.24□□□□□ -0.29
BRCC3-201ENST00000330045 NCKAP5O14513 1909 aa13.24□□□□□ -0.29
BRCC3-201ENST00000330045 AHCTF1Q8WYP5 2266 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 C7orf77A4D0Y5 90 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 DUSP3P51452 185 aaPredicted RBP13.23□□□□□ -0.29
BRCC3-201ENST00000330045 EWSR1Q01844 656 aaKnown RBP eCLIP13.23□□□□□ -0.29
BRCC3-201ENST00000330045 DAZAP2Q15038 168 aaPredicted RBP13.23□□□□□ -0.29
BRCC3-201ENST00000330045 SPSB4Q96A44 273 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 C1QTNF5Q9BXJ0 243 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 LOC400499M0QZD8 3231 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 LRRC3CA6NJW4 275 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 M0R036 132 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 CDS2O95674 445 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 MMP7P09237 267 aaPredicted RBP13.23□□□□□ -0.29
BRCC3-201ENST00000330045 GNRHRP30968 328 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 MEOX2P50222 304 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 CLDN15P56746 228 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 SRPXP78539 464 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 RNF212Q495C1 297 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 PLA2G2CQ5R387 149 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 DBX2Q6ZNG2 339 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 FAM185AQ8N0U4 392 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 OR2C3Q8N628 320 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 ABHD3Q8WU67 409 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 BOD1Q96IK1 185 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 IP6K3Q96PC2 410 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 ZFHX4Q86UP3 3567 aa13.23□□□□□ -0.29
BRCC3-201ENST00000330045 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 TRDCB7Z8K6 153 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 RPL36A-HNRNPH2H7BZ11 118 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF44P15621 663 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 ASCL1P50553 236 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 SNRPEP62304 92 aaKnown RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 TMEM182Q6ZP80 229 aaPredicted RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 CPEB3Q8NE35 698 aaKnown RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 POM121Q96HA1 1249 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 PBDC1Q9BVG4 233 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 PRDM14Q9GZV8 571 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 KNTC1P50748 2209 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 CYTIPO60759 359 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 MT-ND4LP03901 98 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 CD59P13987 128 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 ACP1P24666 158 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 LMO1P25800 156 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 OTX2P32243 289 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 RPS18P62269 152 aaKnown RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 Q0VFX4 171 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 EXTL1Q92935 676 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF845Q96IR2 970 aaPredicted RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 USB1Q9BQ65 265 aaKnown RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 TUBA4BQ9H853 241 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 SLC7A10Q9NS82 523 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 UBE2J1Q9Y385 318 aaPredicted RBP13.22□□□□□ -0.29
BRCC3-201ENST00000330045 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
BRCC3-201ENST00000330045 MED19A0JLT2 244 aaPredicted RBP13.21□□□□□ -0.29
BRCC3-201ENST00000330045 FAM24AA6NFZ4 105 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 UMAD1C9J7I0 102 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 IGHV3-9P01782 118 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 IGHEP01854 428 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 NKX2-1P43699 371 aaPredicted RBP13.21□□□□□ -0.29
BRCC3-201ENST00000330045 SPIN3Q5JUX0 258 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 CDCP2Q5VXM1 449 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 Q8NFD4 153 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 FAM213BQ8TBF2 198 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
BRCC3-201ENST00000330045 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 SLC35B3Q9H1N7 401 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 DEPPQ9NTK1 212 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 FBXO7Q9Y3I1 522 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 A0A1W2PNU3 283 aaPredicted RBP13.21□□□□□ -0.29
BRCC3-201ENST00000330045 GDF1P27539 372 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 PPP1R32Q7Z5V6 425 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 LFNGQ8NES3 379 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 ISOC2Q96AB3 205 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
BRCC3-201ENST00000330045 FAM90A10PA6NDY2 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A8PA6NJQ4 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A7PA6NKC0 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A22PA8MWA6 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A23PA8MXZ1 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 K7N7A8 449 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 EIF3GO75821 320 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A15PP0C7V4 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A13PP0C7W8 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A14PP0C7W9 464 aa13.2□□□□□ -0.3
BRCC3-201ENST00000330045 FAM90A24PP0C7X0 464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms