RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 ZNF417Q8TAU3 575 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 FAM46BQ96A09 425 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM230Q96A57 120 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 RASD2Q96D21 266 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 TVP23CQ96ET8 276 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 RCC1LQ96I51 464 aaKnown RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 B3GAT1Q9P2W7 334 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 NXT1Q9UKK6 140 aaKnown RBP8.19□□□□□ -1.1
CAPN3-201ENST00000318023 PAM16Q9Y3D7 125 aa8.19□□□□□ -1.1
CAPN3-201ENST00000318023 TRBV5-5A0A0J9YX44 114 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 A0A1W2PR48 441 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 NKX6-3A6NJ46 265 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 TRAPPC6AO75865 159 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CD1AP06126 327 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CD55P08174 381 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CD46P15529 392 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 GNB2P62879 340 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PLAURQ03405 335 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF66Q6ZN08 573 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 S100A7AQ86SG5 101 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 POC1AQ8NBT0 407 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 UBE2E3Q969T4 207 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PPP1R14AQ96A00 147 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 TBX15Q96SF7 602 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CABLES2Q9BTV7 478 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 NMNAT2Q9BZQ4 307 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 C5orf66Q9H5L9 145 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 WFDC1Q9HC57 220 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 AHSPQ9NZD4 102 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 MED31Q9Y3C7 131 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PCSK5Q92824 1860 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 SLC17A2O00624 439 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 UPK3AO75631 287 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 WISP2O76076 250 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF10P21506 573 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-201ENST00000318023 SELENOTP62341 195 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PCOLCEQ15113 449 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF468Q5VIY5 522 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-201ENST00000318023 OPN5Q6U736 354 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 SMIM15Q7Z3B0 74 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PRR22Q8IZ63 422 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 SLC16A11Q8NCK7 471 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 NPEPL1Q8NDH3 523 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 NT5CQ8TCD5 201 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM37Q8WXS4 190 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CDS1Q92903 461 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM18Q96B42 140 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 C2orf50Q96LR7 162 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-201ENST00000318023 IGHV1-45A0A0A0MS14 117 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 A0A0A6YYH2 397 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 A0A1B0GUS0 222 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ANKUB1A6NFN9 424 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 A6NJ64 397 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 C17orf105B2RV13 164 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF264O43296 627 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PNPP00491 289 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CEBPEQ15744 281 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 IAH1Q2TAA2 248 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM128Q5BJH2 165 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 COL5A1-AS1Q5SY13 56 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 PLXDC2Q6UX71 529 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 OR2AJ1Q8NGZ0 328 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF700Q9H0M5 742 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 WDR54Q9H977 334 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 RAB18Q9NP72 206 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 CKLFQ9UBR5 152 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 NAGKQ9UJ70 344 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 SPACA6W5XKT8 324 aa8.18□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF407Q9C0G0 2248 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 FAM221AA4D161 298 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 WIPF3A6NGB9 483 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 GAPDHP04406 335 aaKnown RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 NGFRP08138 427 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 SLC6A6P31641 620 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 UQCRFS1P47985 274 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 SUPT4H1P63272 117 aaKnown RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 ASPHD2Q6ICH7 369 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 FAHD2BQ6P2I3 314 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 GBGT1Q8N5D6 347 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 ZFP62Q8NB50 900 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 NUP43Q8NFH3 380 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 RPS4Y2Q8TD47 263 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 CNRIP1Q96F85 164 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 FAHD2AQ96GK7 314 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 ADAD1Q96M93 576 aaKnown RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 WSB1Q9Y6I7 421 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 HSBP1L1C9JCN9 74 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 XRCC2O43543 280 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM127O75204 238 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 OR2J2O76002 312 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 IDH3GP51553 393 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-201ENST00000318023 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
CAPN3-201ENST00000318023 DCXRQ7Z4W1 244 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms