RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 TMED3Q9Y3Q3 217 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 FER1L5A0AVI2 2057 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 A0A096LPE4 126 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 C3orf85A0A1B0GTC6 90 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 SPAARA0A1B0GVQ0 90 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 A0A1W2PPZ6 126 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 H7C1Q1 480 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 PDCD6O75340 191 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 IFNA5P01569 189 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 SERPINE2P07093 398 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 FUT3P21217 361 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 DSCR4P56555 118 aaPredicted RBP9.13□□□□□ -0.95
COL3A1-202ENST00000317840 B2MP61769 119 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 EWSR1Q01844 656 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL3A1-202ENST00000317840 RAB35Q15286 201 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 COMMD1Q8N668 190 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 FOXB1Q99853 325 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
COL3A1-202ENST00000317840 LNP1A1A4G5 178 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ADAM20O43506 726 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 PPYP01298 95 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 HEXAP06865 529 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 PTGDSP41222 190 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 RPL23AP62750 156 aaKnown RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 IL13RA2Q14627 380 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM187Q14656 261 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 HIST2H3AQ71DI3 136 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 MRPL21Q7Z2W9 205 aaKnown RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 TMEM123Q8N131 208 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 SNIP1Q8TAD8 396 aaKnown RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF845Q96IR2 970 aaPredicted RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 TIMM10BQ9Y5J6 103 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 LIPGQ9Y5X9 500 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 COL6A6A6NMZ7 2263 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ZFP92A6NM28 416 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 SYNGR4O95473 234 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 CNOT4O95628 575 aaKnown RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 CCL2P13500 99 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 HAAOP46952 286 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 S100A12P80511 92 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 RUNX1Q01196 453 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 STX12Q86Y82 276 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 SCGB1C1Q8TD33 95 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 EXTL1Q92935 676 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 S100PBPQ96BU1 408 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 NIPSNAP3BQ9BS92 247 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 CHCHD2Q9Y6H1 151 aaPredicted RBP9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 LINC00587B1AMM8 73 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 MT-CO3P00414 261 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 LYL1P12980 280 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ATP6V0CP27449 155 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 FAM27BQ5VT28 67 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF100Q8IYN0 542 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 CT55Q8WUE5 264 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF251Q9BRH9 671 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 LIME1Q9H400 295 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 WFDC1Q9HC57 220 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 TUBD1Q9UJT1 453 aa9.12□□□□□ -0.95
COL3A1-202ENST00000317840 IGLV3-12A0A075B6K2 115 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 A0A087WZY1 265 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 A0A1W2PPE3 182 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 MPPED1O15442 326 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 HLA-HP01893 362 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 DTYMKP23919 212 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 FUT6P51993 359 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 MRPS34P82930 218 aaKnown RBP9.11□□□□□ -0.95
COL3A1-202ENST00000317840 ZNF92Q03936 586 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 KCNMB1Q16558 191 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 SLC25A53Q5H9E4 307 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 OR2Y1Q8NGV0 311 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 RDH5Q92781 318 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 SLC7A10Q9NS82 523 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 B4GALT7Q9UBV7 327 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 TCFL5Q9UL49 500 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 KCNS2Q9ULS6 477 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 V9GYS6 101 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 IGHV3-64DA0A0J9YX35 117 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 HS3ST1O14792 307 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 TOX3O15405 576 aaPredicted RBP9.11□□□□□ -0.95
COL3A1-202ENST00000317840 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
COL3A1-202ENST00000317840 CBR3O75828 277 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 PCBD1P61457 104 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 RAB11AP62491 216 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 RAC1P63000 192 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 SRPXP78539 464 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 CXorf66Q5JRM2 361 aaPredicted RBP9.11□□□□□ -0.95
COL3A1-202ENST00000317840 ACER2Q5QJU3 275 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 TP53RKQ96S44 253 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 GNG13Q9P2W3 67 aa9.11□□□□□ -0.95
COL3A1-202ENST00000317840 MRPL33O75394 65 aaKnown RBP9.11□□□□□ -0.95
COL3A1-202ENST00000317840 LIFP15018 202 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms