RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 Q8N2B8 174 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 OR4D6Q8NGJ1 314 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CFHR4Q92496 578 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 CREB3L1Q96BA8 519 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 GPER1Q99527 375 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 FGF20Q9NP95 211 aaPredicted RBP14.32□□□□□ -0.12
TPM1-203ENST00000317516 DPM3Q9P2X0 92 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 FOXJ3Q9UPW0 622 aa14.32□□□□□ -0.12
TPM1-203ENST00000317516 ODAMA1E959 279 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 ALDOBP05062 364 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 CDK2P24941 298 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 BRS3P32247 399 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 GLIPR1P48060 266 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 ZP1P60852 638 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 ZSCAN26Q16670 478 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 ARSJQ5FYB0 599 aaPredicted RBP14.31□□□□□ -0.12
TPM1-203ENST00000317516 KRBOX4Q5JUW0 171 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 LDLRAD2Q5SZI1 272 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 Q6P435 159 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 RPL22L1Q6P5R6 122 aaKnown RBP14.31□□□□□ -0.12
TPM1-203ENST00000317516 RNF144BQ7Z419 303 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 TMEM219Q86XT9 240 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 ZNF565Q8N9K5 539 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 PXT1Q8NFP0 134 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 GPR148Q8TDV2 347 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 JAM3Q9BX67 310 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 OR6C3Q9NZP0 311 aa14.31□□□□□ -0.12
TPM1-203ENST00000317516 LEUTXA8MZ59 168 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 SLC33A1O00400 549 aaPredicted RBP14.3□□□□□ -0.12
TPM1-203ENST00000317516 TOR1AO14656 332 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 MMP23AO75900 390 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 LIMS3P0CW19 117 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 LIMS4P0CW20 117 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 CEACAM3P40198 252 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 PTGFRP43088 359 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 PRRX1P54821 245 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 BDH1Q02338 343 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 PRAMEF5Q5TYX0 476 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 ELP2Q6IA86 826 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 SATL1Q86VE3 508 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 C11orf44Q8N8P7 122 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 APH1BQ8WW43 257 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 CAPSLQ8WWF8 208 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 AKR1E2Q96JD6 320 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 NR1H4Q96RI1 486 aaPredicted RBP14.3□□□□□ -0.12
TPM1-203ENST00000317516 BARHL1Q9BZE3 327 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 ZNF702PQ9H963 129 aa14.3□□□□□ -0.12
TPM1-203ENST00000317516 ZNF729A6NN14 1252 aaPredicted RBP14.29□□□□□ -0.12
TPM1-203ENST00000317516 FAM90A22PA8MWA6 464 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 MYL12AP19105 171 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 SOX2P48431 317 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
TPM1-203ENST00000317516 EMX1Q04741 257 aaPredicted RBP14.29□□□□□ -0.12
TPM1-203ENST00000317516 MED21Q13503 144 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 CDK5R1Q15078 307 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 RSU1Q15404 277 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 TTC23Q5W5X9 447 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 OR4P4Q8NGL7 312 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 TNFAIP8L1Q8WVP5 186 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 C8orf4Q9NR00 106 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 SERTAD4Q9NUC0 356 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 CHCHD3Q9NX63 227 aaKnown RBP14.29□□□□□ -0.12
TPM1-203ENST00000317516 ING3Q9NXR8 418 aa14.29□□□□□ -0.12
TPM1-203ENST00000317516 MEGF11A6BM72 1044 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 H0YJX3 145 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 WBP4O75554 376 aaKnown RBP14.28□□□□□ -0.12
TPM1-203ENST00000317516 CD34P28906 385 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 C21orf33P30042 268 aaPredicted RBP14.28□□□□□ -0.12
TPM1-203ENST00000317516 PPP3R1P63098 170 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 SMN1Q16637 294 aaKnown RBP14.28□□□□□ -0.12
TPM1-203ENST00000317516 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 C16orf82Q7Z2V1 217 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 SETD9Q8NE22 299 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 COQ2Q96H96 371 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 NCOR1P1Q9H4R4 102 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 BABAM2Q9NXR7 383 aa14.28□□□□□ -0.12
TPM1-203ENST00000317516 KBTBD11-OT1A0A1B0GTJ5 212 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 FBXO24O75426 580 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 KCNJ3P48549 501 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 ETV1P50549 477 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 HABP2Q14520 560 aaPredicted RBP14.27□□□□□ -0.13
TPM1-203ENST00000317516 IL13RA2Q14627 380 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 ATXN7L3Q14CW9 347 aaPredicted RBP14.27□□□□□ -0.13
TPM1-203ENST00000317516 PAN3Q58A45 887 aaKnown RBP14.27□□□□□ -0.13
TPM1-203ENST00000317516 CCDC144NLQ6NUI1 221 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 OR51T1Q8NGJ9 327 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 CNIH3Q8TBE1 160 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 TMEM106AQ96A25 262 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 S100A13Q99584 98 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 TMEM138Q9NPI0 162 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 PCDHB16Q9NRJ7 776 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 TAS2R4Q9NYW5 299 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 ZNF281Q9Y2X9 895 aa14.27□□□□□ -0.13
TPM1-203ENST00000317516 EXOSC1Q9Y3B2 195 aaKnown RBP14.27□□□□□ -0.13
TPM1-203ENST00000317516 MEIKINA0A087WXM9 373 aa14.26□□□□□ -0.13
TPM1-203ENST00000317516 A0A087X0M5 115 aa14.26□□□□□ -0.13
TPM1-203ENST00000317516 A0A1B0GX30 115 aa14.26□□□□□ -0.13
TPM1-203ENST00000317516 OOSP1A8MZH6 123 aa14.26□□□□□ -0.13
TPM1-203ENST00000317516 GABRPO00591 440 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms