RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 C8orf33Q9H7E9 229 aaPredicted RBP11.79□□□□□ -0.52
NPAS4-201ENST00000311034 CALHM2Q9HA72 323 aa11.79□□□□□ -0.52
NPAS4-201ENST00000311034 GNG13Q9P2W3 67 aa11.79□□□□□ -0.52
NPAS4-201ENST00000311034 HDGFL3Q9Y3E1 203 aa11.79□□□□□ -0.52
NPAS4-201ENST00000311034 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
NPAS4-201ENST00000311034 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 SSX9Q7RTT3 188 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 OR2C3Q8N628 320 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 ZNF611Q8N823 705 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 RHBDD1Q8TEB9 315 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 SYT3Q9BQG1 590 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 NIPSNAP3BQ9BS92 247 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 LILRA5A6NI73 299 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 YKT6O15498 198 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 MSR1P21757 451 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
NPAS4-201ENST00000311034 C3AR1Q16581 482 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 HEPN1Q6WQI6 88 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 LRP11Q86VZ4 500 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 FAM89BQ8N5H3 189 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 COMMD1Q8N668 190 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 TP53RKQ96S44 253 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 PNRC2Q9NPJ4 139 aaKnown RBP11.78□□□□□ -0.52
NPAS4-201ENST00000311034 ANAPC10Q9UM13 185 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 AADACP22760 399 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 RAB1AP62820 205 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
NPAS4-201ENST00000311034 PHYHD1Q5SRE7 291 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 SLC25A47Q6Q0C1 308 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 SLC25A26Q70HW3 274 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 GJC3Q8NFK1 279 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 POC1BQ8TC44 478 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 NAT6Q93015 286 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 KCNS2Q9ULS6 477 aa11.78□□□□□ -0.52
NPAS4-201ENST00000311034 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.52
NPAS4-201ENST00000311034 GAMTQ14353 236 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 OXGR1Q96P68 337 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 C12orf49Q9H741 205 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 MYOTQ9UBF9 498 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 ST3GAL6Q9Y274 331 aa11.77□□□□□ -0.52
NPAS4-201ENST00000311034 LAMA5O15230 3695 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 IGSF23A1L1A6 192 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 CCL3P10147 92 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 FOSL2P15408 326 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 PAX6P26367 422 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
NPAS4-201ENST00000311034 ERVFRD-1P60508 538 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.53
NPAS4-201ENST00000311034 LCN15Q6UWW0 184 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF441Q8N8Z8 693 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF488Q96MN9 340 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 DMRT1Q9Y5R6 373 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 PLCE1Q9P212 2302 aa11.77□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ADAM20O43506 726 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 SLC34A2O95436 690 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CDX1P47902 265 aaPredicted RBP11.76□□□□□ -0.53
NPAS4-201ENST00000311034 DYNLT3P51808 116 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF154Q13106 437 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 STX12Q86Y82 276 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
NPAS4-201ENST00000311034 TUBA4BQ9H853 241 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF286AQ9HBT8 521 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 HS3ST3B1Q9Y662 390 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 MGAQ8IWI9 3026 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 HOXA5P20719 270 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ARL6IP1Q15041 203 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 SLC16A14Q7RTX9 510 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CMTM1Q8IZ96 169 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 LFNGQ8NES3 379 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 OR5L2Q8NGL0 311 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 MVB12AQ96EY5 273 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 SNX22Q96L94 193 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 MRGPRX4Q96LA9 322 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CPAMD8Q8IZJ3 1885 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF729A6NN14 1252 aaPredicted RBP11.76□□□□□ -0.53
NPAS4-201ENST00000311034 SELEP16581 610 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ECI1P42126 302 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CCR5P51681 352 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ZNF266Q14584 549 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 CCDC54Q8NEL0 328 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 NTNG2Q96CW9 530 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 MUCL1Q96DR8 90 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 Q96M66 194 aa11.76□□□□□ -0.53
NPAS4-201ENST00000311034 MSTNO14793 375 aa11.75□□□□□ -0.53
NPAS4-201ENST00000311034 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
NPAS4-201ENST00000311034 PLA2G5P39877 138 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms