RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 PPA2Q9H2U2 334 aa18.21■□□□□ 0.51
SNUPN-201ENST00000308588 KCNK15Q9H427 330 aa18.21■□□□□ 0.51
SNUPN-201ENST00000308588 NIPBLQ6KC79 2804 aaeCLIP18.21■□□□□ 0.51
SNUPN-201ENST00000308588 A0A1W2PQ09 198 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 OR7C1O76099 320 aaPredicted RBP18.2■□□□□ 0.5
SNUPN-201ENST00000308588 BPNT1O95861 308 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 FSHBP01225 129 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 TFAP2AP05549 437 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 CLDN12P56749 244 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 EDDM3BP56851 147 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 EDDM3AQ14507 147 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 RAB11BQ15907 218 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 MPV17LQ2QL34 196 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 TIMM50Q3ZCQ8 353 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 GDPGP1Q6ZNW5 385 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 FAM185AQ8N0U4 392 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 Q96M66 194 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 CST11Q9H112 138 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 ONECUT1Q9UBC0 465 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 KPTNQ9Y664 436 aa18.2■□□□□ 0.5
SNUPN-201ENST00000308588 IFITM5A6NNB3 132 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 TMEM14DPA8MWL7 114 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 CSN2P05814 226 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 CFPP27918 469 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 SDC2P34741 201 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 UNC119Q13432 240 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 KLF17Q5JT82 389 aaPredicted RBP18.19■□□□□ 0.5
SNUPN-201ENST00000308588 HES5Q5TA89 166 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 TPRA1Q86W33 373 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 TPRX1Q8N7U7 411 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 KCNG3Q8TAE7 436 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 NANPQ8TBE9 248 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 TBX15Q96SF7 602 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 STEAP1Q9UHE8 339 aa18.19■□□□□ 0.5
SNUPN-201ENST00000308588 SETD2Q9BYW2 2564 aaPredicted RBP18.19■□□□□ 0.5
SNUPN-201ENST00000308588 SMIM30A4D0T7 59 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 HSPB6O14558 160 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 AIREO43918 545 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 TOX4O94842 621 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 MPIG6BO95866 241 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 ARSBP15848 533 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 HOXB4P17483 251 aaPredicted RBP18.18■□□□□ 0.5
SNUPN-201ENST00000308588 SRD5A1P18405 259 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 ERP29P30040 261 aaKnown RBP18.18■□□□□ 0.5
SNUPN-201ENST00000308588 SRP14P37108 136 aaKnown RBP18.18■□□□□ 0.5
SNUPN-201ENST00000308588 AESQ08117 197 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 ZNF273Q14593 569 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 PAN3Q58A45 887 aaKnown RBP18.18■□□□□ 0.5
SNUPN-201ENST00000308588 METTL11BQ5VVY1 283 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 BPIFB2Q8N4F0 458 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 TEX29Q8N6K0 151 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 KIR3DL3Q8N743 410 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 Q8N7P7 452 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 OR51D1Q8NGF3 324 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 PCGF1Q9BSM1 259 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 FUNDC2Q9BWH2 189 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 NAV3Q8IVL0 2385 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 ALDH3B2P48448 385 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 TCF23Q7RTU1 214 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 SUMF2Q8NBJ7 301 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 FAM3DQ96BQ1 224 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 COQ2Q96H96 371 aa18.18■□□□□ 0.5
SNUPN-201ENST00000308588 DPCDQ9BVM2 203 aaPredicted RBP18.18■□□□□ 0.5
SNUPN-201ENST00000308588 DSCAML1Q8TD84 2053 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 MEX3AA1L020 520 aaKnown RBP18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A10PA6NDY2 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A18PA6NE21 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A16PA6NEW6 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A20PA6NIJ5 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A8PA6NJQ4 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A7PA6NKC0 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A22PA8MWA6 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A12PA8MX19 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A5PA8MXJ8 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A23PA8MXZ1 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 M0R1W7 72 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 AIPO00170 330 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A15PP0C7V4 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A13PP0C7W8 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A14PP0C7W9 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM90A24PP0C7X0 464 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 FAM157CP0CG43 387 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 P2RX3P56373 397 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 MEF2CQ06413 473 aaPredicted RBP18.17■□□□□ 0.5
SNUPN-201ENST00000308588 ATXN7L3Q14CW9 347 aaPredicted RBP18.17■□□□□ 0.5
SNUPN-201ENST00000308588 C2orf76Q3KRA6 126 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 SIGIRRQ6IA17 410 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 C1orf122Q6ZSJ8 110 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 C11orf42Q8N5U0 333 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 TMEM59Q9BXS4 323 aa18.17■□□□□ 0.5
SNUPN-201ENST00000308588 RCC2Q9P258 522 aaKnown RBP18.17■□□□□ 0.5
SNUPN-201ENST00000308588 NOTOA8MTQ0 251 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 LDLRAD4O15165 306 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 CLEC2LP0C7M8 214 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 CCL3L1P16619 93 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 TGFBR1P36897 503 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 GLIPR1P48060 266 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 RPS27AP62979 156 aaKnown RBP18.16■□□□□ 0.5
SNUPN-201ENST00000308588 ATAD3CQ5T2N8 411 aa18.16■□□□□ 0.5
SNUPN-201ENST00000308588 BRICD5Q6PL45 260 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms