RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RNF115Q9Y4L5 304 aa5.87□□□□□ -1.47
PTCD2-201ENST00000308077 TRAV6A0A075B6T7 132 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 hCG_1807616A0A1W2PRN6 198 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 A8MV72 311 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF736B4DX44 427 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 PRSS44E7EML9 344 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 HSPB6O14558 160 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 RAB3DO95716 219 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 TFF1P04155 84 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 HNRNPCP07910 306 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 FCGR3AP08637 254 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 HRH1P35367 487 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 SERPINF1P36955 418 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 GATA4P43694 442 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CBX5P45973 191 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CEBPDP49716 269 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 TNFAIP6P98066 277 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF146Q15072 292 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 MICBQ29980 383 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 RSBN1Q5VWQ0 802 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ACP7Q6ZNF0 438 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 MOGAT3Q86VF5 341 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZCCHC24Q8N2G6 241 aaKnown RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 BPIFB2Q8N4F0 458 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 SUMF2Q8NBJ7 301 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 OR51S1Q8NGJ8 323 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 LRRC29Q8WV35 223 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 SLC6A7Q99884 636 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CMSS1Q9BQ75 279 aaKnown RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ST6GALNAC5Q9BVH7 336 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 IFT22Q9H7X7 185 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 NUDT15Q9NV35 164 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ETAA1Q9NY74 926 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 IL19Q9UHD0 177 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 FLVCR2Q9UPI3 526 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 C17orf100A8MU93 164 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 SRRM5B3KS81 715 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 HS3ST1O14792 307 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 OR2H2O95918 312 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 PMP2P02689 132 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CSN2P05814 226 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ADH4P08319 380 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 RNF224P0DH78 156 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 GLRA1P23415 457 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 APOBEC3AP31941 199 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 FAUP35544 74 aaKnown RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF672Q499Z4 452 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 AGAP6Q5VW22 663 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF782Q6ZMW2 699 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 BTN2A1Q7KYR7 527 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 TGIF2LYQ8IUE0 185 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 GCSAMQ8N6F7 178 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 BEST4Q8NFU0 473 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CHAC2Q8WUX2 184 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 RDH5Q92781 318 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CREB3L1Q96BA8 519 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 C20orf85Q9H1P6 137 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 GCM1Q9NP62 436 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF701Q9NV72 531 aaPredicted RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 CISD1Q9NZ45 108 aaKnown RBP5.86□□□□□ -1.47
PTCD2-201ENST00000308077 NUBP2Q9Y5Y2 271 aa5.86□□□□□ -1.47
PTCD2-201ENST00000308077 DYSFO75923 2080 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 ARFGEF3Q5TH69 2177 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 RAI1Q7Z5J4 1906 aaPredicted RBP5.85□□□□□ -1.47
PTCD2-201ENST00000308077 TANC2Q9HCD6 1990 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 INMT-MINDY4F8WBC2 141 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 M0R233 179 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 SIRPB1O00241 398 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 SLC33A1O00400 549 aaPredicted RBP5.85□□□□□ -1.47
PTCD2-201ENST00000308077 DEGS1O15121 323 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 NDUFB6O95139 128 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 LHBP01229 141 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 AMY2AP04746 511 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 CD55P08174 381 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 ZNF44P15621 663 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 IGFBP2P18065 325 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 AMY2BP19961 511 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 DTYMKP23919 212 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 CFHR2P36980 270 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 CCL8P80075 99 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 EFNB3Q15768 340 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 TATDN3Q17R31 274 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 RNASE10Q5GAN6 216 aaKnown RBP5.85□□□□□ -1.47
PTCD2-201ENST00000308077 SPIN3Q5JUX0 258 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 OR10Z1Q8NGY1 313 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 OR4K15Q8NH41 348 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 MRGPRFQ96AM1 343 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 DPCDQ9BVM2 203 aaPredicted RBP5.85□□□□□ -1.47
PTCD2-201ENST00000308077 FN3KRPQ9HA64 309 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 DCAF16Q9NXF7 216 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 TREM2Q9NZC2 230 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 COPZ2Q9P299 210 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 OR14J1Q9UGF5 321 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 METRNQ9UJH8 293 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 PLEKHA6Q9Y2H5 1048 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 ALG5Q9Y673 324 aa5.85□□□□□ -1.47
PTCD2-201ENST00000308077 A0A1W2PPR1 153 aa5.84□□□□□ -1.47
PTCD2-201ENST00000308077 MCRIP1C9JLW8 97 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms