RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OR10A7Q8NGE5 316 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 BEX4Q9NWD9 120 aaPredicted RBP11.18□□□□□ -0.62
USP38-201ENST00000307017 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 FAM157CP0CG43 387 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 CYSLTR2Q9NS75 346 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 SELENOKQ9Y6D0 94 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 MELTFP08582 738 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 GABRG3Q99928 467 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 FRRS1LQ9P0K9 344 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 RALYQ9UKM9 306 aaKnown RBP11.18□□□□□ -0.62
USP38-201ENST00000307017 SNAI2O43623 268 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 PNLIPRP2P54317 469 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 RUNX1Q01196 453 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 TFF2Q03403 129 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 ZNF766Q5HY98 468 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 FAM209AQ5JX71 171 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 ZNF707Q96C28 371 aaPredicted RBP11.18□□□□□ -0.62
USP38-201ENST00000307017 OR6C3Q9NZP0 311 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 hADV38S2A0JD32 116 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 PSG2P11465 335 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 CTLA4P16410 223 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 HOXC13P31276 330 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 RANP62826 216 aaKnown RBP11.18□□□□□ -0.62
USP38-201ENST00000307017 WDR88Q6ZMY6 472 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 NAA60Q9H7X0 242 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 SIGLEC7Q9Y286 467 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 MTCH2Q9Y6C9 303 aa11.18□□□□□ -0.62
USP38-201ENST00000307017 MS4A18H0YCH9 400 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 M0R3E3 92 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 PLRG1O43660 514 aaKnown RBP11.17□□□□□ -0.62
USP38-201ENST00000307017 FAM3BP58499 235 aaPredicted RBP11.17□□□□□ -0.62
USP38-201ENST00000307017 FXYD3Q14802 87 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 MICBQ29980 383 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 MS4A18Q3C1V0 323 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 HIKESHIQ53FT3 197 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CLEC18BQ6UXF7 455 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TIMP4Q99727 224 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CCL28Q9NRJ3 127 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 GPR27Q9NS67 375 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TRGV5A0A0B4J1U4 118 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CST4P01036 141 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 SLC6A1P30531 599 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
USP38-201ENST00000307017 AESQ08117 197 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 RTL10Q7L3V2 364 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CHAC2Q8WUX2 184 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 SCN8AQ9UQD0 1980 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TRAV1-2A0A0B4J238 106 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 KMT5CQ86Y97 462 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 OR2C3Q8N628 320 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 STARD4Q96DR4 205 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 HS3ST3A1Q9Y663 406 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 NKX2-6A6NCS4 301 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 FUT3P21217 361 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 MPLP40238 635 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 SFTPA2Q8IWL1 248 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 C10orf111Q8N326 155 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 DEFB124Q8NES8 71 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 FAM222BQ8WU58 562 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CAPZBP47756 277 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 HLA-DRB3P79483 266 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 IL10RAQ13651 578 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TMEM196Q5HYL7 178 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 PDPNQ86YL7 162 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 APCDD1LQ8NCL9 501 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 OR10D3Q8NH80 312 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 CIB3Q96Q77 187 aaPredicted RBP11.17□□□□□ -0.62
USP38-201ENST00000307017 NPAS1Q99742 590 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 PITPNC1Q9UKF7 332 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
USP38-201ENST00000307017 MUC21A0A0G2JKD1 596 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 MUC21A0A140T8X8 626 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 M0R143 59 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 RGS13O14921 159 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 APCSP02743 223 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 PCMT1P22061 227 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 MUC21Q5SSG8 566 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 C12orf73Q69YU5 71 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
USP38-201ENST00000307017 FXYD1O00168 92 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 RARRES2Q99969 163 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 ELF5Q9UKW6 265 aaPredicted RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 TNFAIP6P98066 277 aaPredicted RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 ZNF343Q6P1L6 599 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 ZNF547Q8IVP9 402 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 NEU1Q99519 415 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 DNAJB12Q9NXW2 375 aaKnown RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 CLDN34H7C241 214 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 TCTEX1D1Q8N7M0 179 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms