RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TAAR5O14804 337 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 TCAPO15273 167 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 PGA4P0DJD7 388 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 PGA3P0DJD8 388 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 RUNX1Q01196 453 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 HABP2Q14520 560 aaPredicted RBP12.27□□□□□ -0.45
SDC2-201ENST00000302190 RTL6Q6ICC9 239 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
SDC2-201ENST00000302190 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 PTGER4P35408 488 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 DHODHQ02127 395 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 TMEM267Q0VDI3 215 aaPredicted RBP12.26□□□□□ -0.45
SDC2-201ENST00000302190 ZNF266Q14584 549 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
SDC2-201ENST00000302190 OR10D3Q8NH80 312 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 C7orf77A4D0Y5 90 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 FIGNL2A6NMB9 653 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 AADACP22760 399 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 IL2RGP31785 369 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 FGF8P55075 233 aaPredicted RBP12.26□□□□□ -0.45
SDC2-201ENST00000302190 ADIRFQ15847 76 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 TMEM105Q8N8V8 129 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 NMES1Q9C002 83 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 PCNX3Q9H6A9 2034 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 CLN5O75503 358 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 CBR3O75828 277 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 ZNF735P0CB33 412 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 SLC25A4P12235 298 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 MDKP21741 143 aaPredicted RBP12.26□□□□□ -0.45
SDC2-201ENST00000302190 EDDM3AQ14507 147 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 VHLLQ6RSH7 139 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 ARL6IP6Q8N6S5 226 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 CDH20Q9HBT6 801 aa12.26□□□□□ -0.45
SDC2-201ENST00000302190 IGKV3D-11A0A0A0MRZ8 115 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 NXPH2O95156 264 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 G0S2P27469 103 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ZNF345Q14585 488 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 OR10S1Q8NGN2 331 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 FAM131CQ96AQ9 280 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 SPOCK3Q9BQ16 436 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 SLC26A1Q9H2B4 701 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 UNKLQ9H9P5 680 aaKnown RBP12.25□□□□□ -0.45
SDC2-201ENST00000302190 PLEKHA2Q9HB19 425 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 C5orf52A6NGY3 159 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 FTCDNL1E5RQL4 147 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ZNF587BE7ETH6 402 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ARF1P84077 181 aaKnown RBP12.25□□□□□ -0.45
SDC2-201ENST00000302190 ZNF383Q8NA42 475 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 CADM4Q8NFZ8 388 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
SDC2-201ENST00000302190 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 LIPGQ9Y5X9 500 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 A0A1W2PQM1 296 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 NKX2-6A6NCS4 301 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 DBX1A6NMT0 343 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 SLC31A2O15432 143 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 EFNA2O43921 213 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 CD74P04233 296 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ISG15P05161 165 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 FUT3P21217 361 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 PMP22Q01453 160 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ASPHD2Q6ICH7 369 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 FDX2Q6P4F2 183 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 C5orf24Q7Z6I8 188 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 OR10J5Q8NHC4 309 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 GGACTQ9BVM4 153 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 PRO1933Q9H354 126 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 NAA60Q9H7X0 242 aa12.25□□□□□ -0.45
SDC2-201ENST00000302190 ERRFI1Q9UJM3 462 aaPredicted RBP12.25□□□□□ -0.45
SDC2-201ENST00000302190 PRR14LQ5THK1 2151 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 A0A1W2PR77 199 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 AQP7P3A6NL99 342 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 TMEM14DPA8MWL7 114 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 DVL1P1P54792 670 aaPredicted RBP12.24□□□□□ -0.45
SDC2-201ENST00000302190 DSCR4P56555 118 aaPredicted RBP12.24□□□□□ -0.45
SDC2-201ENST00000302190 EXT1Q16394 746 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 SPINK9Q5DT21 86 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 KMT5CQ86Y97 462 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 ASB13Q8WXK3 278 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 STRADBQ9C0K7 418 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 KCNIP1Q9NZI2 227 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 IGKV1D-8A0A087WSZ0 117 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 C3orf80F5H4A9 247 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 FAHD2BQ6P2I3 314 aaPredicted RBP12.24□□□□□ -0.45
SDC2-201ENST00000302190 FAHD2AQ96GK7 314 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 IP6K3Q96PC2 410 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 BOKQ9UMX3 212 aaPredicted RBP12.24□□□□□ -0.45
SDC2-201ENST00000302190 GAB2Q9UQC2 676 aa12.24□□□□□ -0.45
SDC2-201ENST00000302190 A0A1B0GTI1 187 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms