RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 POC1AQ8NBT0 407 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 PACRGQ96M98 296 aaPredicted RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CEP192Q8TEP8 1941 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 LY6G6EA0A0G2JKS1 128 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 A0A0G2JMM0 328 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 A0A1W2PPB8 328 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 A0A1W2PRS3 328 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 KIR3DP1A8MWS1 328 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 K7ESF4 209 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HSPB6O14558 160 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 LIFP15018 202 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF32P17041 273 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ANKRD39Q53RE8 183 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 FAM89BQ8N5H3 189 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ADPRHL1Q8NDY3 354 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 OR1J1Q8NGS3 322 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 SAP25Q8TEE9 199 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 U3KQA8 63 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CACNA1DQ01668 2161 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 IGLV3-32A0A0A0MS00 114 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 OR7C1O76099 320 aaPredicted RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF708P17019 499 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CCL1P22362 96 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 TMEM33P57088 247 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CARD18P57730 90 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 OR10J5Q8NHC4 309 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ADAMTS17Q8TE56 1095 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF442Q9H7R0 627 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 ANXA10Q9UJ72 324 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 OR5H1A6NKK0 313 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 UMODP07911 640 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 OR5AC1P0C628 307 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 DSCR4P56555 118 aaPredicted RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 AAED1Q7RTV5 226 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 NABP1Q96AH0 204 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 TAAR9Q96RI9 348 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 GPHA2Q96T91 129 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 SPOCK3Q9BQ16 436 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 NUDT16L1Q9BRJ7 211 aaKnown RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF728P0DKX0 622 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 HKR1P10072 659 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 RPS2P15880 293 aaKnown RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 IL2RGP31785 369 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 UBE2KP61086 200 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 WIPI1Q5MNZ9 446 aaPredicted RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 CRIP3Q6Q6R5 217 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 LYZL2Q7Z4W2 148 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 OR11L1Q8NGX0 322 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 RTN4IP1Q8WWV3 396 aaPredicted RBP11.67□□□□□ -0.54
CTDP1-202ENST00000299543 LIME1Q9H400 295 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 CBLN4Q9NTU7 201 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 TRBV6-7A0A0A0MS04 114 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 IGHV1-45A0A0A0MS14 117 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 HOXA6P31267 233 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 NTF4P34130 210 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 CD200P41217 278 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 H3F3AP84243 136 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 KCNMB1Q16558 191 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 BTNL8Q6UX41 500 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 HIST3H2BBQ8N257 126 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 ZIC4Q8N9L1 334 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
CTDP1-202ENST00000299543 A0A0U1RQV5 110 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 NRASP01111 189 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 P04436 131 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 CCL2P13500 99 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 TRA2AQ13595 282 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTDP1-202ENST00000299543 CEACAM16Q2WEN9 425 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 SPIN3Q5JUX0 258 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 PLCXD3Q63HM9 321 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 HEPN1Q6WQI6 88 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
CTDP1-202ENST00000299543 SLC16A14Q7RTX9 510 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
CTDP1-202ENST00000299543 SMIM8Q96KF7 97 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 PRRX2Q99811 253 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 SNHG12Q9BXW3 62 aa11.66□□□□□ -0.54
CTDP1-202ENST00000299543 P4HTMQ9NXG6 502 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms