RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 BCL3P20749 454 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 C9orf62Q8N4C0 152 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OR10G9Q8NGN4 311 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 OR10G7Q8NGN6 311 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 APOBEC4Q8WW27 367 aaKnown RBP11.24□□□□□ -0.61
PTCD1-201ENST00000292478 SCMH1Q96GD3 660 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 NUDT16L1Q9BRJ7 211 aaKnown RBP11.24□□□□□ -0.61
PTCD1-201ENST00000292478 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 SCN4AP35499 1836 aa11.24□□□□□ -0.61
PTCD1-201ENST00000292478 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 HLA-DRB3P79483 266 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 SRSF5Q13243 272 aaKnown RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 C19orf35Q6ZS72 473 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 RAB1CQ92928 201 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 ARID1BQ8NFD5 2236 aaPredicted RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 GABRA6Q16445 453 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 ZNRF4Q8WWF5 429 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 TGIF2Q9GZN2 237 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 TRAPPC1Q9Y5R8 145 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 CD3EP07766 207 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 HLA-GP17693 338 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 PRR27Q6MZM9 219 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 FZR1Q9UM11 496 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 DSPPQ9NZW4 1301 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 MAP1BP46821 2468 aaKnown RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 ADAP1O75689 374 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 MRPS11P82912 194 aaKnown RBP11.23□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF345Q14585 488 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 DCAF10Q5QP82 559 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 FBXW9Q5XUX1 488 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 TMEM167BQ9NRX6 74 aa11.23□□□□□ -0.61
PTCD1-201ENST00000292478 GALR1P47211 349 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 MYPOPQ86VE0 399 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 UBALD1Q8TB05 177 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 C7orf66A4D0T2 115 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 NCBP2LA6PVI3 153 aaKnown RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 ZNF785A8K8V0 405 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 PMELP40967 661 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 C4orf17Q53FE4 359 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 KHDC1LQ5JSQ8 128 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 LOXL4Q96JB6 756 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 FAM103A1Q9BTL3 118 aaKnown RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 PPP1R3EQ9H7J1 279 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 NTMQ9P121 344 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 MMP24Q9Y5R2 645 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 A0A1B0GU03 582 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 RBP4P02753 201 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 FAM219AQ8IW50 185 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 SLC22A18ASQ8N1D0 253 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 CA5BP1Q8WTZ4 195 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 TRMT61AQ96FX7 289 aaKnown RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 RNF7Q9UBF6 113 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 TRBV5-5A0A0J9YX44 114 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 RBFOX3A6NFN3 312 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 SNCGO76070 127 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 SP1P08047 785 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 PAX6P26367 422 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 ASCL1P50553 236 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 DYNLT3P51808 116 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 PAX5Q02548 391 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 Q56UQ5 140 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 NFAM1Q8NET5 270 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 CCL17Q92583 94 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 OR2W1Q9Y3N9 320 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 KIR3DL2P43630 455 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 GNG4P50150 75 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 TEX30Q5JUR7 227 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 HSD17B10Q99714 261 aaKnown RBP11.22□□□□□ -0.61
PTCD1-201ENST00000292478 FSCN3Q9NQT6 498 aa11.22□□□□□ -0.61
PTCD1-201ENST00000292478 CENPVL1A0A0U1RR11 272 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 SH2D7A6NKC9 451 aaPredicted RBP11.21□□□□□ -0.61
PTCD1-201ENST00000292478 SMIM10L1P0DMW3 83 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 RPS4Y1P22090 263 aaKnown RBP11.21□□□□□ -0.61
PTCD1-201ENST00000292478 ROM1Q03395 351 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 SIGIRRQ6IA17 410 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 MISP3Q96FF7 219 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 SMIM10Q96HG1 83 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 UCN2Q96RP3 112 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 C12orf57Q99622 126 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 B4DEV8 164 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 PPIHO43447 177 aaKnown RBP11.21□□□□□ -0.61
PTCD1-201ENST00000292478 TTRP02766 147 aa11.21□□□□□ -0.61
PTCD1-201ENST00000292478 LSM11P83369 360 aaKnown RBP eCLIP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms